Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_14520 and IAI47_14525 are separated by 3 nucleotidesIAI47_14525 and IAI47_14530 are separated by 45 nucleotidesIAI47_14530 and IAI47_14535 are separated by 15 nucleotidesIAI47_14535 and IAI47_14540 overlap by 4 nucleotides IAI47_14520: IAI47_14520 - type B 50S ribosomal protein L31, at 3,067,202 to 3,067,462 _14520 IAI47_14525: IAI47_14525 - 50S ribosomal protein L36, at 3,067,466 to 3,067,606 _14525 IAI47_14530: IAI47_14530 - metal ABC transporter substrate-binding protein, at 3,067,652 to 3,068,530 _14530 IAI47_14535: IAI47_14535 - metal ABC transporter permease, at 3,068,546 to 3,069,385 _14535 IAI47_14540: IAI47_14540 - ABC transporter ATP-binding protein, at 3,069,382 to 3,070,050 _14540
Group Condition IAI47_14520 IAI47_14525 IAI47_14530 IAI47_14535 IAI47_14540
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -0.4 -0.5 -0.3 -0.3
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 -0.7 -0.4 +0.2 -0.5
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.5 -0.9 -0.5 +0.5 -0.1
stress Manganese (II) chloride tetrahydrate 50 uM, aerobic -0.9 -0.3 -0.1 +0.1 -0.3
survival Survival; Treatment=FW106 (pH3.9); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.3 -0.8 -0.2 +0.4 -0.4
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.6 -0.7 -0.3 +0.2 -0.0
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 -0.4 +0.2 -0.5 -0.0
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 -0.6 +0.0 +0.5 -0.2
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.7 +0.2 -0.5 +0.4 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 -0.4 -0.2 +0.4 -0.2
nitrogen source Ammonium chloride (N) -0.6 +0.6 -0.2 -0.0 -0.6
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 -0.9 +0.1 -0.3 +0.6
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.0 -1.2 -0.2 +0.5 +0.3
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.5 -0.8 -0.2 -0.1 +0.1
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 -0.4 -0.1 -0.5 +0.3
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.5 -0.7 -0.2 +0.2 -0.2
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.7 -0.3 -0.2 +0.4 +0.5
no stress control Defined media control, anaerobic -0.4 +0.2 +0.1 -0.4 +0.4
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 +0.1 -0.4 +0.4 +0.3
stress copper (II) chloride 2 uM, anaerobic -0.6 -0.0 +0.7 +0.4 -0.1
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.6 +0.0 +0.5 +0.3
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 -0.4 -0.1 -0.1 +0.6
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.8 +0.2 -0.3 -0.1 +0.1
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 -0.4 +0.1 +0.2 +0.5
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.5 -0.3 -0.2 +0.4 +0.4
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 +0.5 +0.1 +0.5 +0.1
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 -0.4 +0.1 +0.6 +0.3
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 +0.8 +0.0 -0.4 +0.3
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.9 -0.2 +0.2 +0.3 +0.4
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 +0.6 +0.1 +0.6 +0.3
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IAI47_14520
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IAI47_14525
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IAI47_14535
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IAI47_14540
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