Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_14385 and IAI47_14390 overlap by 1 nucleotidesIAI47_14390 and IAI47_14395 overlap by 13 nucleotidesIAI47_14395 and IAI47_14400 are separated by 97 nucleotidesIAI47_14400 and IAI47_14405 are separated by 70 nucleotides IAI47_14385: IAI47_14385 - SPFH/Band 7/PHB domain protein, at 3,037,843 to 3,038,757 _14385 IAI47_14390: IAI47_14390 - NfeD family protein, at 3,038,757 to 3,039,203 _14390 IAI47_14395: IAI47_14395 - Cu(I)-responsive transcriptional regulator, at 3,039,191 to 3,039,595 _14395 IAI47_14400: IAI47_14400 - copper-exporting P-type ATPase CopA, at 3,039,693 to 3,042,206 _14400 IAI47_14405: IAI47_14405 - TraB/GumN family protein, at 3,042,277 to 3,043,080 _14405
Group Condition IAI47_14385 IAI47_14390 IAI47_14395 IAI47_14400 IAI47_14405
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 +0.7 -3.6 -0.6 -0.4
stress Manganese (II) chloride tetrahydrate 50 uM, anaerobic -0.1 -0.8 -0.5 -0.7 -0.2
stress copper (II) chloride 5 uM, aerobic -0.0 +0.1 -1.5 -0.5 -0.3
stress Nickel (II) chloride 40 uM, aerobic +0.1 -0.1 -1.6 -0.0 -0.2
stress copper (II) chloride 5 uM, aerobic +0.1 +0.2 -1.2 -0.8 -0.1
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -1.0 -0.2 -0.1 -0.1
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 -0.8 -0.2 -0.0 -0.5
stress Nickel (II) chloride 40 uM, aerobic -0.1 +0.0 -1.5 -0.1 +0.0
stress Nickel (II) chloride 40 uM, aerobic +0.1 +0.0 -1.6 +0.3 -0.2
stress Manganese (II) chloride tetrahydrate 50 uM, anaerobic -0.1 -0.6 -0.1 -0.7 -0.0
carbon source Ying_all64 rep A; time point 3 -0.1 -0.2 -0.3 -0.4 -0.5
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 -0.5 -0.1 -0.6 -0.1
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.8 -0.3 -0.2 -0.1
stress copper (II) chloride 5 uM, aerobic +0.1 +0.1 -0.7 -0.5 -0.1
stress Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic -0.1 -0.2 +0.2 -1.0 +0.1
no stress control Defined media control, aerobic -0.0 -0.6 +0.2 -0.1 -0.5
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 +0.2 +0.2 -0.5 -0.6
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 +0.4 -0.1 -0.4 -0.6
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.6 +0.2 -0.6 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50 +0.0 +0.2 -0.2 +0.1 -0.8
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 +0.3 -0.1 -0.4 -0.4
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 -0.7 +0.1 +0.2 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 +0.5 -0.5 +0.3 -0.2
stress copper (II) chloride 2 uM, anaerobic -0.1 +0.1 -0.9 +1.4 -0.1
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 +0.4 +0.4 +0.2 -0.4
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 +0.5 +0.3 +0.5 -0.3
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 +0.5 +0.6 +0.1 -0.3
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 +1.0 +0.2 +0.2 -0.2
stress copper (II) chloride 2 uM, anaerobic +0.4 -0.3 -0.7 +2.9 -0.3
stress copper (II) chloride 2 uM, anaerobic +0.0 -0.5 -0.9 +3.3 +0.2
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