Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_14040 and IAI47_14045 are separated by 100 nucleotidesIAI47_14045 and IAI47_14050 are separated by 80 nucleotidesIAI47_14050 and IAI47_14055 are separated by 169 nucleotidesIAI47_14055 and IAI47_14060 are separated by 122 nucleotides IAI47_14040: IAI47_14040 - D-alanyl-D-alanine carboxypeptidase DacA, at 2,967,453 to 2,968,664 _14040 IAI47_14045: IAI47_14045 - YbeD family protein, at 2,968,765 to 2,969,028 _14045 IAI47_14050: IAI47_14050 - lipoyl(octanoyl) transferase LipB, at 2,969,109 to 2,969,768 _14050 IAI47_14055: IAI47_14055 - lipoyl synthase, at 2,969,938 to 2,970,903 _14055 IAI47_14060: IAI47_14060 - twin-arginine translocase subunit TatE, at 2,971,026 to 2,971,229 _14060
Group Condition IAI47_14040 IAI47_14045 IAI47_14050 IAI47_14055 IAI47_14060
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 N.D. N.D. N.D. -2.9
stress copper (II) chloride 5 uM, aerobic -1.2 N.D. N.D. N.D. -0.6
stress Nickel (II) chloride 40 uM, aerobic -1.1 N.D. N.D. N.D. -0.3
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 N.D. N.D. N.D. -1.3
stress Nickel (II) chloride 40 uM, aerobic -1.3 N.D. N.D. N.D. -0.0
stress copper (II) chloride 5 uM, aerobic -1.1 N.D. N.D. N.D. -0.2
stress copper (II) chloride 2 uM, anaerobic -0.2 N.D. N.D. N.D. -0.9
stress Nickel (II) chloride 40 uM, aerobic -1.1 N.D. N.D. N.D. +0.1
carbon source Ying_Others16 rep A; time point 2 -0.4 N.D. N.D. N.D. -0.6
carbon source Ying_OrganicAcid7 rep B; time point 3 -0.4 N.D. N.D. N.D. -0.5
stress copper (II) chloride 5 uM, aerobic -1.0 N.D. N.D. N.D. +0.2
stress Cobalt chloride 10 uM, aerobic -0.3 N.D. N.D. N.D. -0.5
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 N.D. N.D. N.D. -0.8
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 N.D. N.D. N.D. -0.9
nitrogen source TNT (N) -0.6 N.D. N.D. N.D. -0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=6hrs; Outgrowth=LBkan50 -0.0 N.D. N.D. N.D. -0.7
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 N.D. N.D. N.D. -0.7
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 N.D. N.D. N.D. -0.6
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 N.D. N.D. N.D. -0.6
stress dichromate 5 uM, aerobic +0.4 N.D. N.D. N.D. -0.3
stress Manganese (II) chloride tetrahydrate 50 uM, aerobic +0.5 N.D. N.D. N.D. -0.3
carbon source Ying_sugar7 rep B; time point 3 -0.3 N.D. N.D. N.D. +0.5
nitrogen source nitrogen source nitrate 5mM +0.6 N.D. N.D. N.D. -0.2
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 N.D. N.D. N.D. +0.8
stress dichromate 5 uM, aerobic +0.5 N.D. N.D. N.D. +0.3
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 N.D. N.D. N.D. +0.6
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.0 N.D. N.D. N.D. +0.9
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 N.D. N.D. N.D. +0.7
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 N.D. N.D. N.D. +0.8
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 N.D. N.D. N.D. +0.9
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