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Protein
Homologs
Fitness for 5 genes in
Pantoea sp. MT58
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
IAI47_13855 and IAI47_13860 are separated by 348 nucleotides
IAI47_13860 and IAI47_13865 are separated by 64 nucleotides
IAI47_13865 and IAI47_13870 are separated by 234 nucleotides
IAI47_13870 and IAI47_13875 are separated by 152 nucleotides
IAI47_13855: IAI47_13855 - flavodoxin FldA, at 2,932,526 to 2,933,056
_13855
IAI47_13860: IAI47_13860 - ferric iron uptake transcriptional regulator, at 2,933,405 to 2,933,848
_13860
IAI47_13865: IAI47_13865 - hypothetical protein, at 2,933,913 to 2,934,308
_13865
IAI47_13870: IAI47_13870 - glutamine--tRNA ligase, at 2,934,543 to 2,936,210
_13870
IAI47_13875: IAI47_13875 - PTS transporter subunit EIIC, at 2,936,363 to 2,938,390
_13875
Group
Condition
IAI47
_13855
IAI47
_13860
IAI47
_13865
IAI47
_13870
IAI47
_13875
survival
Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
N.D.
N.D.
-0.5
N.D.
-0.1
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
N.D.
N.D.
-0.6
N.D.
-0.1
survival
Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
N.D.
N.D.
-0.5
N.D.
-0.1
survival
Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50
N.D.
N.D.
-0.4
N.D.
-0.2
carbon source
Ying_sugar7 rep C; time point 2
N.D.
N.D.
-0.6
N.D.
+0.1
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
N.D.
N.D.
-0.4
N.D.
-0.1
stress
copper (II) chloride 2 uM, anaerobic
N.D.
N.D.
-0.6
N.D.
+0.0
survival
Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
N.D.
N.D.
-0.5
N.D.
-0.0
carbon source
Ying_sugar7 rep A; time point 2
N.D.
N.D.
-0.5
N.D.
+0.1
stress
Cobalt chloride 10 uM, anaerobic
N.D.
N.D.
-0.4
N.D.
+0.1
carbon source
Ying_Nucleobase14 rep A; time point 3
N.D.
N.D.
-0.3
N.D.
+0.2
survival
Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50
N.D.
N.D.
-0.3
N.D.
+0.2
carbon source
Ying_sugar7 rep C; time point 3
N.D.
N.D.
-0.3
N.D.
+0.3
survival
Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
N.D.
N.D.
-0.2
N.D.
+0.3
stress
Aluminum potassium sulfate dodecahydrate 1 mM, aerobic
N.D.
N.D.
+0.5
N.D.
-0.0
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
N.D.
N.D.
+0.4
N.D.
+0.1
survival
Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
N.D.
N.D.
+0.4
N.D.
+0.1
survival
Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
N.D.
N.D.
+0.2
N.D.
+0.3
survival
Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
N.D.
N.D.
+0.4
N.D.
+0.2
survival
Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
N.D.
N.D.
+0.3
N.D.
+0.2
survival
Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
N.D.
N.D.
+0.4
N.D.
+0.2
stress
Aluminum potassium sulfate dodecahydrate 1 mM, aerobic
N.D.
N.D.
+0.5
N.D.
+0.1
stress
copper (II) chloride 2 uM, anaerobic
N.D.
N.D.
+0.5
N.D.
+0.1
survival
Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=24hrs; Outgrowth=LBkan50
N.D.
N.D.
+0.4
N.D.
+0.2
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50
N.D.
N.D.
+0.4
N.D.
+0.2
survival
Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
N.D.
N.D.
+0.5
N.D.
+0.1
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
N.D.
N.D.
+0.4
N.D.
+0.3
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
N.D.
N.D.
+0.5
N.D.
+0.2
survival
Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
N.D.
N.D.
+0.6
N.D.
+0.1
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
N.D.
N.D.
+0.6
N.D.
+0.2
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