Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_13730 and IAI47_13735 overlap by 1 nucleotidesIAI47_13735 and IAI47_13740 are separated by 67 nucleotidesIAI47_13740 and IAI47_13745 are separated by 15 nucleotidesIAI47_13745 and IAI47_13750 are separated by 200 nucleotides IAI47_13730: IAI47_13730 - succinate--CoA ligase subunit alpha, at 2,906,437 to 2,907,312 _13730 IAI47_13735: IAI47_13735 - ADP-forming succinate--CoA ligase subunit beta, at 2,907,312 to 2,908,478 _13735 IAI47_13740: IAI47_13740 - 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase, at 2,908,546 to 2,909,769 _13740 IAI47_13745: IAI47_13745 - 2-oxoglutarate dehydrogenase E1 component, at 2,909,785 to 2,912,592 _13745 IAI47_13750: IAI47_13750 - succinate dehydrogenase iron-sulfur subunit, at 2,912,793 to 2,913,509 _13750
Group Condition IAI47_13730 IAI47_13735 IAI47_13740 IAI47_13745 IAI47_13750
no stress control Defined media control, aerobic N.D. N.D. -4.1 -4.1 -1.2
stress copper (II) chloride 5 uM, aerobic N.D. N.D. -4.0 -4.4 -0.1
carbon source Ying_Nucleobase14 rep B; time point 3 N.D. N.D. -2.2 -3.4 -2.8
no stress control Defined media control, aerobic N.D. N.D. -4.2 -2.9 -1.2
carbon source Ying_AminoAcid20 rep C; time point 3 N.D. N.D. -2.2 -3.3 -2.8
carbon source Ying_AminoAcid20 rep A; time point 3 N.D. N.D. -2.1 -3.3 -2.7
carbon source Ying_AminoAcid20 rep B; time point 3 N.D. N.D. -2.1 -3.3 -2.7
stress dichromate 5 uM, aerobic N.D. N.D. -3.8 -3.8 -0.5
carbon source Ying_Others16 rep C; time point 3 N.D. N.D. -2.1 -3.2 -2.7
carbon source Ying_AminoAcid20 rep B; time point 2 N.D. N.D. -1.8 -2.9 -3.3
stress copper (II) chloride 5 uM, aerobic N.D. N.D. -4.1 -3.8 +0.0
carbon source Ying_Nucleobase14 rep A; time point 3 N.D. N.D. -2.1 -3.2 -2.7
stress Cobalt chloride 10 uM, aerobic N.D. N.D. -4.2 -2.9 -0.9
stress Nickel (II) chloride 40 uM, aerobic N.D. N.D. -4.1 -4.1 +0.3
carbon source Ying_Nucleobase14 rep C; time point 3 N.D. N.D. -2.1 -3.2 -2.6
carbon source Ying_Others16 rep B; time point 3 N.D. N.D. -1.8 -3.3 -2.8
stress Cadmium acetate 8 uM, aerobic N.D. N.D. -4.0 -2.7 -1.1
carbon source Ying_Others16 rep A; time point 2 N.D. N.D. -1.9 -2.6 -3.2
carbon source Ying_AminoAcid20 rep C; time point 2 N.D. N.D. -1.9 -3.0 -2.8
carbon source Ying_OrganicAcid7 rep B; time point 3 N.D. N.D. -2.0 -3.1 -2.6
carbon source Ying_OrganicAcid7 rep A; time point 3 N.D. N.D. -1.9 -3.1 -2.6
no stress control Defined media control, aerobic N.D. N.D. -2.5 -4.6 -0.6
carbon source Ying_Others16 rep A; time point 3 N.D. N.D. -1.7 -3.2 -2.7
stress Nickel (II) chloride 40 uM, aerobic N.D. N.D. -4.1 -3.6 +0.2
nitrogen source nitrogen source nitrite 1mM N.D. N.D. -3.6 -3.8 -0.2
carbon source Ying_OrganicAcid7 rep C; time point 2 N.D. N.D. -1.8 -2.8 -2.9
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. +3.1 +2.2 +2.3
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. +2.5 +2.4 +2.8
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. +2.9 +2.4 +2.7
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. +3.9 +2.8 +2.4
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