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Protein
Homologs
Fitness for 5 genes in
Pantoea sp. MT58
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
IAI47_13695 and IAI47_13700 are separated by 13 nucleotides
IAI47_13700 and IAI47_13705 overlap by 4 nucleotides
IAI47_13705 and IAI47_13710 are separated by 178 nucleotides
IAI47_13710 and IAI47_13715 overlap by 1 nucleotides
IAI47_13695: IAI47_13695 - colicin uptake protein TolR, at 2,901,020 to 2,901,448
_13695
IAI47_13700: IAI47_13700 - Tol-Pal system protein TolQ, at 2,901,462 to 2,902,148
_13700
IAI47_13705: IAI47_13705 - tol-pal system-associated acyl-CoA thioesterase, at 2,902,145 to 2,902,549
_13705
IAI47_13710: IAI47_13710 - cyd operon protein YbgE, at 2,902,728 to 2,903,021
_13710
IAI47_13715: IAI47_13715 - cytochrome bd-I oxidase subunit CydX, at 2,903,021 to 2,903,125
_13715
Group
Condition
IAI47
_13695
IAI47
_13700
IAI47
_13705
IAI47
_13710
IAI47
_13715
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-4.0
-5.2
-0.1
-1.1
N.D.
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-4.0
-5.3
-0.7
-0.4
N.D.
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-4.0
-5.4
-0.5
-0.3
N.D.
survival
Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
-4.1
-4.9
-0.2
-0.7
N.D.
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-4.1
-4.9
-0.3
-0.2
N.D.
survival
Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
-3.8
-4.0
-0.5
-0.6
N.D.
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-4.0
-4.2
-0.7
-0.2
N.D.
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50
-3.2
-5.7
-0.1
+0.2
N.D.
survival
Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
-4.0
-4.3
-0.3
-0.1
N.D.
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-2.9
-5.7
+0.4
-0.5
N.D.
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-3.9
-4.6
+0.1
-0.2
N.D.
survival
Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-3.2
-4.6
-0.1
-0.5
N.D.
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50
-3.0
-5.8
+0.1
+0.3
N.D.
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50
-2.9
-5.3
+0.2
-0.3
N.D.
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-4.0
-4.2
-0.1
+0.0
N.D.
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-3.9
-3.0
-0.3
-1.1
N.D.
survival
Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-3.0
-4.9
-0.0
-0.3
N.D.
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-4.0
-3.8
-0.4
+0.1
N.D.
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50
-2.9
-5.0
+0.0
-0.3
N.D.
survival
Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-3.9
-3.3
-0.2
-0.7
N.D.
stress
copper (II) chloride 5 uM, aerobic
-3.9
-3.3
-0.3
-0.6
N.D.
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50
-2.9
-4.8
-0.2
-0.1
N.D.
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50
-3.1
-4.7
-0.0
-0.3
N.D.
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50
-2.9
-5.3
+0.0
+0.1
N.D.
survival
Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-3.1
-4.7
+0.4
-0.6
N.D.
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50
-3.0
-5.1
-0.1
+0.2
N.D.
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-3.0
-5.0
+0.3
-0.1
N.D.
survival
Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-3.1
-5.1
+0.7
+0.1
N.D.
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-3.0
-4.6
+0.3
+0.2
N.D.
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-3.0
-4.7
+0.4
+0.2
N.D.
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