Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_13525 and IAI47_13530 overlap by 1 nucleotidesIAI47_13530 and IAI47_13535 are separated by 86 nucleotidesIAI47_13535 and IAI47_13540 are separated by 75 nucleotidesIAI47_13540 and IAI47_13545 are separated by 242 nucleotides IAI47_13525: IAI47_13525 - 8-amino-7-oxononanoate synthase, at 2,869,038 to 2,870,189 _13525 IAI47_13530: IAI47_13530 - biotin synthase BioB, at 2,870,189 to 2,871,220 _13530 IAI47_13535: IAI47_13535 - adenosylmethionine--8-amino-7-oxononanoate transaminase, at 2,871,307 to 2,872,611 _13535 IAI47_13540: IAI47_13540 - kinase inhibitor, at 2,872,687 to 2,873,163 _13540 IAI47_13545: IAI47_13545 - 6-phosphogluconolactonase, at 2,873,406 to 2,874,407 _13545
Group Condition IAI47_13525 IAI47_13530 IAI47_13535 IAI47_13540 IAI47_13545
nitrogen source Ammonium chloride (N) -0.6 -1.9 -1.6 -0.2 -0.8
stress copper (II) chloride 2 uM, anaerobic -0.4 -0.3 +0.1 -0.9 -0.5
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.3 -0.3 -0.4 -0.3 -1.0
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 -0.2 -0.0 -0.3 -1.2
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.1 -0.5 -0.5 -1.3
carbon source Ying_sugar7 rep C; time point 2 -0.3 +0.0 -0.0 +0.3 -1.9
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 +0.1 -0.1 -0.5 -1.1
nitrogen source TNT (N) -0.2 -0.2 +0.2 -0.2 -1.1
carbon source Ying_Nucleobase14 rep C; time point 3 -0.0 +0.1 +0.1 +0.0 -1.8
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 +0.1 +0.2 -0.1 -1.3
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 -0.0 -0.0 +0.1 -1.7
carbon source Ying_all64 rep A; time point 3 +0.1 +0.2 -0.0 -0.2 -1.5
carbon source Ying_Nucleobase14 rep A; time point 3 +0.3 +0.1 -0.0 +0.1 -1.7
carbon source Ying_sugar7 rep C; time point 3 +0.1 +0.3 -0.0 +0.3 -1.7
carbon source Ying_sugar7 rep B; time point 3 +0.4 +0.1 -0.0 +0.2 -1.7
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.4 +0.1 +0.1 +0.0 -1.4
carbon source Ying_Nucleobase14 rep B; time point 3 +0.2 +0.0 +0.2 +0.2 -1.5
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 +0.3 +0.1 -0.1 -1.3
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 +0.1 +0.4 +0.1 -1.6
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 +0.5 -0.1 -0.2 -1.1
survival Survival; Treatment=UGA synthetic gw pH3.9; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 +0.3 +0.1 +0.1 -1.3
survival Survival; Treatment=FW106 (pH3.9); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.8 +0.3 +0.1 +0.3 -2.0
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 +0.4 +0.1 -0.4 -0.9
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.7 +0.3 -0.4 -0.0 -0.9
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.6 +0.3 +0.0 +0.0 -1.3
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 +0.3 +0.3 -0.2 -1.0
carbon source Ying_all64 rep C; time point 3 +0.5 +0.3 +0.3 +0.1 -1.3
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.2 +0.2 +0.4 -1.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.5 +0.1 +0.3 +0.2 -1.0
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.5 +0.3 +0.1 +0.8 -1.1
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IAI47_13525
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IAI47_13530
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IAI47_13540
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IAI47_13545
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