Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_13240 and IAI47_13245 are separated by 12 nucleotidesIAI47_13245 and IAI47_13250 are separated by 307 nucleotidesIAI47_13250 and IAI47_13255 overlap by 4 nucleotidesIAI47_13255 and IAI47_13260 are separated by 80 nucleotides IAI47_13240: IAI47_13240 - ABC transporter permease subunit, at 2,799,655 to 2,800,374 _13240 IAI47_13245: IAI47_13245 - transporter substrate-binding domain-containing protein, at 2,800,387 to 2,801,235 _13245 IAI47_13250: IAI47_13250 - N-formylglutamate deformylase, at 2,801,543 to 2,802,334 _13250 IAI47_13255: IAI47_13255 - imidazolonepropionase, at 2,802,331 to 2,803,548 _13255 IAI47_13260: IAI47_13260 - formimidoylglutamate deiminase, at 2,803,629 to 2,804,984 _13260
Group Condition IAI47_13240 IAI47_13245 IAI47_13250 IAI47_13255 IAI47_13260
carbon source Ying_AminoAcid20 rep B; time point 3 -0.1 +0.0 -0.7 -1.4 -2.1
carbon source Ying_AminoAcid20 rep A; time point 3 +0.1 -0.1 -0.7 -1.6 -2.0
carbon source Ying_AminoAcid20 rep C; time point 3 +0.0 -0.0 -0.6 -1.3 -2.0
carbon source Ying_AminoAcid20 rep A; time point 2 +0.1 -0.3 -0.8 -0.8 -1.5
carbon source Ying_AminoAcid20 rep C; time point 2 +0.1 -0.1 -0.5 -1.1 -1.4
carbon source Ying_AminoAcid20 rep B; time point 2 +0.1 -0.3 -0.5 -0.7 -1.6
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 -0.2 -0.2 -0.3 -0.4
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.6 -0.4 -0.2 -0.7 +0.4
carbon source Ying_AminoAcid20 rep B; time point 1 +0.2 -0.3 -0.3 -0.4 -0.6
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.7 +0.1 +0.2 -0.6 -0.1
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 -0.3 -0.2 +0.2 -1.0
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.4 -0.5 +0.1 -0.2 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.2 -0.3 -0.0 -0.7
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -0.6 -0.2 +0.7 -0.3
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 -0.5 +0.1 -0.5 +0.4
survival Survival; Treatment=FW106 (pH3.9); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.6 +0.2 +0.0 -1.2 -0.1
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.3 -0.0 +0.3 -0.7
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.6 +0.0 -0.2 +0.1 -0.9
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.3 -0.6 -0.3 +0.4 +0.3
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.1 +0.1 +0.3 -0.9
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 -0.4 -0.5 +0.2 +0.1 +0.5
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.6 -0.4 +0.1 +0.3 -0.5
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 +0.3 -0.2 +0.3 -0.7
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.7 +0.2 +0.4 +0.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -0.5 -0.2 +0.8 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 -0.4 -0.1 +0.7 +0.5
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.5 -0.4 +0.3 +0.3 +0.1
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 -0.5 +0.2 +0.7 +0.5
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.5 +0.3 +0.0 +0.7 -0.5
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 +0.2 +0.5 +0.1 +0.6
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