Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_13215 and IAI47_13220 are separated by 141 nucleotidesIAI47_13220 and IAI47_13225 are separated by 3 nucleotidesIAI47_13225 and IAI47_13230 are separated by 8 nucleotidesIAI47_13230 and IAI47_13235 overlap by 8 nucleotides IAI47_13215: IAI47_13215 - 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF, at 2,794,895 to 2,795,827 _13215 IAI47_13220: IAI47_13220 - flavin reductase family protein, at 2,795,969 to 2,796,601 _13220 IAI47_13225: IAI47_13225 - histidine ammonia-lyase, at 2,796,605 to 2,798,110 _13225 IAI47_13230: IAI47_13230 - ATP-binding cassette domain-containing protein, at 2,798,119 to 2,798,913 _13230 IAI47_13235: IAI47_13235 - ABC transporter permease subunit, at 2,798,906 to 2,799,646 _13235
Group Condition IAI47_13215 IAI47_13220 IAI47_13225 IAI47_13230 IAI47_13235
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 -0.4 +0.0 -0.1 -0.4
nitrogen source Ammonium chloride (N) +0.4 -0.2 +0.0 +0.0 -0.9
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 +0.2 +0.1 -0.1 -0.5
stress copper (II) chloride 2 uM, anaerobic +0.2 -0.2 +0.3 -0.3 -0.6
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 +0.4 -0.2 -0.3 -0.5
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.5 -0.3 -0.1 +0.0 -0.6
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 -0.4 -0.0 +0.2 -0.3
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 -0.7 -0.1 +0.1 +0.3
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 -0.2 -0.1 -0.3 +0.4
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.5 -0.6 +0.0 -0.0 -0.3
no stress control Defined media control, aerobic -0.2 -0.5 +0.3 +0.2 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.0 -0.0 -0.3 +0.5 -0.4
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 -0.4 -0.2 +0.1 -0.1
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 +0.1 -0.2 +0.2 -0.4
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 -0.5 -0.0 +0.3 -0.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 -0.4 -0.0 +0.4 -0.2
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 -0.4 +0.1 +0.4 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.5 -0.1 -0.3 +0.5 -0.5
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.5 +0.1 -0.1 +0.2 -0.4
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 +0.5 +0.3 -0.2 -0.2 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 -0.1 +0.1 +0.4 -0.2
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 -0.4 +0.3 +0.3 +0.3
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.6 -0.2 -0.2 +0.2 +0.2
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 -0.2 +0.4 +0.3 -0.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.5 -0.3 +0.3 +0.3 -0.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.7 +0.1 +0.0 -0.3
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.7 -0.3 +0.3 +0.2 +0.2
stress copper (II) chloride 2 uM, anaerobic +1.3 -0.2 +0.2 -0.7 +0.7
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.6 -0.1 +0.6 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 +0.2 +0.1 +0.4 +0.2
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IAI47_13215
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IAI47_13220
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IAI47_13230
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IAI47_13235
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