Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_13165 and IAI47_13170 overlap by 4 nucleotidesIAI47_13170 and IAI47_13175 are separated by 149 nucleotidesIAI47_13175 and IAI47_13180 are separated by 20 nucleotidesIAI47_13180 and IAI47_13185 are separated by 680 nucleotides IAI47_13165: IAI47_13165 - DHA2 family efflux MFS transporter permease subunit, at 2,784,543 to 2,786,111 _13165 IAI47_13170: IAI47_13170 - HlyD family secretion protein, at 2,786,108 to 2,787,253 _13170 IAI47_13175: IAI47_13175 - anion permease, at 2,787,403 to 2,788,512 _13175 IAI47_13180: IAI47_13180 - manganese-binding transcriptional regulator MntR, at 2,788,533 to 2,788,991 _13180 IAI47_13185: IAI47_13185 - outer membrane protein OmpX, at 2,789,672 to 2,790,184 _13185
Group Condition IAI47_13165 IAI47_13170 IAI47_13175 IAI47_13180 IAI47_13185
carbon source Ying_sugar7 rep A; time point 3 -0.1 -0.3 +0.0 -4.9 -1.5
carbon source Ying_sugar7 rep C; time point 3 -0.1 -0.3 +0.1 -4.9 -0.9
carbon source Ying_sugar7 rep B; time point 3 -0.2 -0.3 +0.1 -4.7 -1.0
carbon source Ying_OrganicAcid7 rep A; time point 3 -0.0 -0.2 -0.1 -4.7 -1.1
carbon source Ying_sugar7 rep B; time point 2 -0.1 -0.2 +0.1 -5.0 -0.6
carbon source Ying_OrganicAcid7 rep C; time point 3 +0.0 -0.2 +0.0 -4.8 -0.9
stress Cobalt chloride 10 uM, aerobic -0.1 -0.1 +0.0 -5.6 +0.1
stress Uranyl Acetate Dihydrate 200 uM, aerobic -0.0 -0.2 -0.2 -5.1 -0.1
carbon source Ying_Nucleobase14 rep B; time point 3 +0.1 -0.1 -0.0 -4.9 -0.6
carbon source Ying_Nucleobase14 rep A; time point 3 +0.1 -0.2 -0.0 -4.7 -0.7
carbon source Ying_sugar7 rep A; time point 2 -0.0 -0.2 +0.1 -4.6 -0.7
carbon source Ying_Nucleobase14 rep C; time point 3 +0.0 -0.1 +0.0 -4.6 -0.8
carbon source Ying_OrganicAcid7 rep B; time point 3 -0.0 -0.2 -0.0 -4.3 -0.8
carbon source Ying_AminoAcid20 rep B; time point 3 +0.1 -0.1 +0.1 -4.8 -0.6
stress Cobalt chloride 10 uM, aerobic -0.1 -0.0 -0.1 -5.1 +0.0
carbon source Ying_AminoAcid20 rep C; time point 3 +0.1 -0.1 +0.1 -4.9 -0.5
stress Manganese (II) chloride tetrahydrate 50 uM, aerobic -0.0 -0.1 -0.1 -5.2 +0.2
carbon source Ying_Others16 rep B; time point 3 -0.1 -0.3 +0.2 -4.7 -0.3
carbon source Ying_AminoAcid20 rep C; time point 2 -0.1 -0.1 -0.0 -4.7 -0.2
stress Manganese (II) chloride tetrahydrate 50 uM, aerobic -0.1 -0.1 -0.1 -4.8 +0.0
stress Cadmium acetate 8 uM, aerobic +0.0 -0.1 -0.1 -5.0 +0.1
nitrogen source nitrogen source Ammonium chloride 20mM +0.1 -0.1 -0.2 -4.2 -0.6
carbon source Ying_Others16 rep C; time point 3 +0.0 -0.1 +0.1 -4.7 -0.2
no stress control Defined media control, aerobic -0.1 -0.0 +0.1 -5.0 +0.1
carbon source Ying_Others16 rep A; time point 3 +0.1 -0.0 +0.1 -4.6 -0.4
stress Cadmium acetate 8 uM, aerobic +0.2 +0.1 +0.0 -5.0 -0.1
carbon source Ying_AminoAcid20 rep A; time point 3 +0.2 +0.1 +0.2 -4.6 -0.6
no stress control Defined media control, aerobic +0.0 +0.1 -0.1 -4.9 +0.1
stress Manganese (II) chloride tetrahydrate 50 uM, aerobic -0.2 -0.0 -0.1 -4.8 +0.4
stress Nickel (II) chloride 40 uM, aerobic +0.1 +0.2 -0.0 -4.7 -0.2
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