Fitness for 5 genes in Pantoea sp. MT58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 309 experiments or choose conditions or try the comparative fitness browser

500 ntIAI47_13100 and IAI47_13105 are separated by 118 nucleotidesIAI47_13105 and IAI47_13110 are separated by 395 nucleotidesIAI47_13110 and IAI47_13115 overlap by 4 nucleotidesIAI47_13115 and IAI47_13120 overlap by 4 nucleotides IAI47_13100: IAI47_13100 - PQQ-dependent sugar dehydrogenase, at 2,768,161 to 2,769,315 _13100 IAI47_13105: IAI47_13105 - carbonic anhydrase, at 2,769,434 to 2,770,069 _13105 IAI47_13110: IAI47_13110 - DUF4385 domain-containing protein, at 2,770,465 to 2,770,914 _13110 IAI47_13115: IAI47_13115 - glutathione ABC transporter permease GsiD, at 2,770,911 to 2,771,816 _13115 IAI47_13120: IAI47_13120 - glutathione ABC transporter permease GsiC, at 2,771,813 to 2,772,742 _13120
Group Condition IAI47_13100 IAI47_13105 IAI47_13110 IAI47_13115 IAI47_13120
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.0 N.D. -0.7 -0.4 -0.4
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 N.D. -0.2 -0.3 -0.6
stress Manganese (II) chloride tetrahydrate 50 uM, aerobic +0.1 N.D. -0.1 -0.7 -0.5
no stress control Defined media control, aerobic -0.5 N.D. -0.2 -0.1 -0.3
stress Aluminum potassium sulfate dodecahydrate 1 mM, aerobic -0.1 N.D. -0.1 -0.5 -0.5
no stress control Defined media control, anaerobic +0.0 N.D. -0.4 -0.3 -0.4
no stress control Defined media control, aerobic -0.1 N.D. +0.3 -0.8 -0.4
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 N.D. -0.2 -0.7 +0.1
stress Manganese (II) chloride tetrahydrate 50 uM, aerobic +0.1 N.D. -0.1 -0.3 -0.5
stress Cadmium acetate 8 uM, aerobic -0.0 N.D. +0.1 -0.5 -0.5
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 -0.3 N.D. -0.1 +0.1 -0.6
no stress control Defined media control, aerobic +0.1 N.D. -0.2 -0.2 -0.5
stress dichromate 5 uM, aerobic +0.3 N.D. +0.0 -0.5 -0.5
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 N.D. -0.5 -0.3 -0.2
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 N.D. -0.3 -0.6 -0.0
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.6 N.D. -0.0 -0.2 +0.3
stress dichromate 5 uM, aerobic +0.2 N.D. -0.1 -0.5 -0.3
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.6 N.D. +0.2 -0.2 +0.6
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.5 N.D. -0.1 +0.3 -0.7
carbon source Ying_all64 rep A; time point 3 -0.3 N.D. -0.2 +0.3 +0.4
stress copper (II) chloride 2 uM, anaerobic +0.2 N.D. -0.2 -0.4 +0.5
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 N.D. -0.1 +0.3 +0.4
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 N.D. +0.4 -0.2 +0.3
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 N.D. +0.2 +0.3 -0.3
stress copper (II) chloride 2 uM, anaerobic +0.5 N.D. -0.2 +0.2 +0.5
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 N.D. +0.4 +0.2 +0.4
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 N.D. +0.1 +0.3 +0.4
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 N.D. +0.2 +0.2 +0.5
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.6 N.D. +0.6 -0.1 +0.2
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 N.D. +0.4 +0.4 +0.5
remove
IAI47_13100
plot
remove
IAI47_13105
plot
remove
IAI47_13110
remove
IAI47_13115
plot
remove
IAI47_13120
plot