Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_13090 and IAI47_13095 are separated by 272 nucleotidesIAI47_13095 and IAI47_13100 are separated by 138 nucleotidesIAI47_13100 and IAI47_13105 are separated by 118 nucleotidesIAI47_13105 and IAI47_13110 are separated by 395 nucleotides IAI47_13090: IAI47_13090 - serine hydrolase, at 2,765,891 to 2,767,093 _13090 IAI47_13095: IAI47_13095 - HAD-IB family hydrolase, at 2,767,366 to 2,768,022 _13095 IAI47_13100: IAI47_13100 - PQQ-dependent sugar dehydrogenase, at 2,768,161 to 2,769,315 _13100 IAI47_13105: IAI47_13105 - carbonic anhydrase, at 2,769,434 to 2,770,069 _13105 IAI47_13110: IAI47_13110 - DUF4385 domain-containing protein, at 2,770,465 to 2,770,914 _13110
Group Condition IAI47_13090 IAI47_13095 IAI47_13100 IAI47_13105 IAI47_13110
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=12hrs; Outgrowth=LBkan50 -0.3 -0.2 -0.1 N.D. -0.3
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.0 -0.2 -0.4 N.D. -0.2
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 -0.2 -0.5 N.D. -0.2
no stress control Defined media control, aerobic -0.1 +0.1 -0.5 N.D. -0.2
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.4 +0.0 N.D. -0.4
carbon source Ying_all64 rep A; time point 3 -0.2 +0.1 -0.3 N.D. -0.2
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 -0.1 -0.3 N.D. -0.4
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 +0.1 -0.6 N.D. +0.2
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 +0.1 +0.0 N.D. -0.7
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 +0.1 -0.4 N.D. +0.1
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.3 -0.0 +0.3 N.D. -0.5
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 +0.2 -0.6 N.D. -0.0
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 +0.2 -0.4 +0.1 N.D. -0.2
survival Survival; Treatment=FW106 (pH3.9); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 +0.1 -0.3 N.D. -0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 +0.1 +0.3 -0.2 N.D. -0.3
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 +0.2 +0.3 N.D. -0.3
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -0.3 +0.2 N.D. +0.3
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.2 -0.3 N.D. +0.5
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.4 +0.1 N.D. -0.4
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 +0.5 -0.2 N.D. -0.2
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 +0.4 -0.3 N.D. +0.3
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.0 +0.3 N.D. -0.3
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 +0.1 +0.1 N.D. -0.3
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 +0.1 -0.2 N.D. +0.4
nitrogen source nitrogen source nitrite 0.5mM -0.1 -0.1 +0.4 N.D. +0.2
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.2 +0.2 N.D. +0.4
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 +0.0 +0.5 N.D. -0.1
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 +0.2 -0.1 N.D. +0.4
stress copper (II) chloride 2 uM, anaerobic +0.2 +0.4 +0.5 N.D. -0.2
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 -0.1 +0.6 N.D. +0.6
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