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Protein
Homologs
Fitness for 5 genes in
Pantoea sp. MT58
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
IAI47_13090 and IAI47_13095 are separated by 272 nucleotides
IAI47_13095 and IAI47_13100 are separated by 138 nucleotides
IAI47_13100 and IAI47_13105 are separated by 118 nucleotides
IAI47_13105 and IAI47_13110 are separated by 395 nucleotides
IAI47_13090: IAI47_13090 - serine hydrolase, at 2,765,891 to 2,767,093
_13090
IAI47_13095: IAI47_13095 - HAD-IB family hydrolase, at 2,767,366 to 2,768,022
_13095
IAI47_13100: IAI47_13100 - PQQ-dependent sugar dehydrogenase, at 2,768,161 to 2,769,315
_13100
IAI47_13105: IAI47_13105 - carbonic anhydrase, at 2,769,434 to 2,770,069
_13105
IAI47_13110: IAI47_13110 - DUF4385 domain-containing protein, at 2,770,465 to 2,770,914
_13110
Group
Condition
IAI47
_13090
IAI47
_13095
IAI47
_13100
IAI47
_13105
IAI47
_13110
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=12hrs; Outgrowth=LBkan50
-0.3
-0.2
-0.1
N.D.
-0.3
survival
Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
+0.0
-0.2
-0.4
N.D.
-0.2
survival
Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
+0.1
-0.2
-0.5
N.D.
-0.2
no stress control
Defined media control, aerobic
-0.1
+0.1
-0.5
N.D.
-0.2
survival
Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.1
-0.4
+0.0
N.D.
-0.4
carbon source
Ying_all64 rep A; time point 3
-0.2
+0.1
-0.3
N.D.
-0.2
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
+0.2
-0.1
-0.3
N.D.
-0.4
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.3
+0.1
-0.6
N.D.
+0.2
survival
Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
+0.1
+0.1
+0.0
N.D.
-0.7
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.3
+0.1
-0.4
N.D.
+0.1
survival
Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-0.3
-0.0
+0.3
N.D.
-0.5
survival
Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.0
+0.2
-0.6
N.D.
-0.0
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50
+0.2
-0.4
+0.1
N.D.
-0.2
survival
Survival; Treatment=FW106 (pH3.9); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
+0.2
+0.1
-0.3
N.D.
-0.2
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50
+0.1
+0.3
-0.2
N.D.
-0.3
survival
Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.1
+0.2
+0.3
N.D.
-0.3
survival
Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.1
-0.3
+0.2
N.D.
+0.3
survival
Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.1
-0.2
-0.3
N.D.
+0.5
survival
Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.1
+0.4
+0.1
N.D.
-0.4
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
+0.2
+0.5
-0.2
N.D.
-0.2
survival
Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.2
+0.4
-0.3
N.D.
+0.3
survival
Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.2
+0.0
+0.3
N.D.
-0.3
survival
Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.4
+0.1
+0.1
N.D.
-0.3
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.0
+0.1
-0.2
N.D.
+0.4
nitrogen source
nitrogen source nitrite 0.5mM
-0.1
-0.1
+0.4
N.D.
+0.2
survival
Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.2
-0.2
+0.2
N.D.
+0.4
survival
Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
+0.2
+0.0
+0.5
N.D.
-0.1
survival
Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
+0.2
+0.2
-0.1
N.D.
+0.4
stress
copper (II) chloride 2 uM, anaerobic
+0.2
+0.4
+0.5
N.D.
-0.2
survival
Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
+0.2
-0.1
+0.6
N.D.
+0.6
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