Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_13035 and IAI47_13040 are separated by 9 nucleotidesIAI47_13040 and IAI47_13045 are separated by 123 nucleotidesIAI47_13045 and IAI47_13050 are separated by 384 nucleotidesIAI47_13050 and IAI47_13055 are separated by 87 nucleotides IAI47_13035: IAI47_13035 - putrescine ABC transporter permease PotH, at 2,755,441 to 2,756,403 _13035 IAI47_13040: IAI47_13040 - putrescine ABC transporter ATP-binding subunit PotG, at 2,756,413 to 2,757,546 _13040 IAI47_13045: IAI47_13045 - spermidine/putrescine ABC transporter substrate-binding protein PotF, at 2,757,670 to 2,758,779 _13045 IAI47_13050: IAI47_13050 - YbjN domain-containing protein, at 2,759,164 to 2,759,643 _13050 IAI47_13055: IAI47_13055 - 30S ribosomal protein S6--L-glutamate ligase, at 2,759,731 to 2,760,633 _13055
Group Condition IAI47_13035 IAI47_13040 IAI47_13045 IAI47_13050 IAI47_13055
no stress control Defined media control, aerobic +0.1 +0.1 -0.0 -5.6 -0.0
no stress control Defined media control, aerobic +0.0 +0.1 +0.1 -4.9 -0.1
stress Uranyl Acetate Dihydrate 200 uM, aerobic +0.1 -0.1 +0.0 -4.7 -0.0
stress dichromate 5 uM, aerobic +0.4 +0.4 +0.2 -5.1 -0.1
stress Aluminum potassium sulfate dodecahydrate 1 mM, aerobic -0.0 +0.0 +0.1 -3.6 -0.1
no stress control Defined media control, aerobic -0.2 +0.1 -0.1 -3.4 +0.2
stress Uranyl Acetate Dihydrate 200 uM, aerobic +0.1 -0.1 +0.3 -3.8 +0.1
stress Manganese (II) chloride tetrahydrate 50 uM, aerobic +0.2 +0.0 +0.2 -3.6 -0.1
no stress control Defined media control, anaerobic -0.4 -0.6 -0.5 -1.7 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 -0.0 -0.4 -2.6 +0.1
stress Uranyl Acetate Dihydrate 200 uM, aerobic -0.1 +0.0 +0.1 -3.1 +0.1
stress Aluminum potassium sulfate dodecahydrate 1 mM, aerobic +0.0 +0.3 +0.1 -3.4 -0.0
stress dichromate 5 uM, aerobic +0.4 +0.3 +0.4 -4.0 -0.2
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 -0.0 +0.1 -2.2 -0.3
stress Aluminum potassium sulfate dodecahydrate 1 mM, aerobic +0.0 +0.2 +0.1 -3.2 -0.1
stress Manganese (II) chloride tetrahydrate 50 uM, aerobic +0.2 +0.1 +0.1 -3.2 -0.1
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -0.2 +0.2 -2.5 -0.1
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 +0.1 +0.0 -2.7 +0.1
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.1 -0.2 -2.5 -0.1
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 -0.2 +0.1 -2.8 -0.0
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.1 +0.0 -2.7 -0.0
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.2 +0.2 -2.5 +0.2
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 -0.1 +0.2 -2.3 -0.0
stress dichromate 5 uM, aerobic +0.4 +0.4 +0.4 -2.7 +0.2
nitrogen source nitrogen source nitrite 1mM -0.7 -0.6 -0.5 +1.0 +0.1
nitrogen source TNT (N) -0.5 -0.5 -0.5 +1.3 +0.1
nitrogen source nitrogen source nitrite 0.5mM -0.5 -0.4 -0.5 +1.4 +0.1
carbon source Ying_sugar7 rep C; time point 3 -0.3 -0.0 -0.2 +2.5 +0.2
carbon source Ying_sugar7 rep B; time point 3 -0.2 -0.1 -0.0 +2.4 +0.2
stress copper (II) chloride 2 uM, anaerobic -0.1 -0.5 -0.1 +4.4 +0.4
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