Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_12995 and IAI47_13000 are separated by 15 nucleotidesIAI47_13000 and IAI47_13005 are separated by 6 nucleotidesIAI47_13005 and IAI47_13010 overlap by 1 nucleotidesIAI47_13010 and IAI47_13015 are separated by 115 nucleotides IAI47_12995: IAI47_12995 - arginine ABC transporter ATP-binding protein ArtP, at 2,749,150 to 2,749,878 _12995 IAI47_13000: IAI47_13000 - arginine ABC transporter substrate-binding protein, at 2,749,894 to 2,750,625 _13000 IAI47_13005: IAI47_13005 - arginine ABC transporter permease ArtQ, at 2,750,632 to 2,751,348 _13005 IAI47_13010: IAI47_13010 - arginine ABC transporter permease ArtM, at 2,751,348 to 2,752,016 _13010 IAI47_13015: IAI47_13015 - arginine ABC transporter substrate-binding protein, at 2,752,132 to 2,752,863 _13015
Group Condition IAI47_12995 IAI47_13000 IAI47_13005 IAI47_13010 IAI47_13015
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 -0.1 -0.3 -0.6 -0.2 -0.0
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50 -0.4 +0.2 -0.2 -0.2 -0.5
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 -0.3 +0.0 -0.2 -0.3 -0.3
carbon source Ying_Others16 rep A; time point 3 -0.1 -0.5 -0.3 -0.4 +0.2
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.6 +0.0 +0.1 +0.0 -0.5
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 -0.0 -0.5 -0.2 -0.3
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -0.3 -0.2 +0.3 -0.3
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.5 +0.0 -0.2 -0.3 -0.6
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 -0.3 -0.5 +0.4 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 +0.0 -0.2 -0.3 -0.3
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 -0.4 -0.0 +0.3 +0.1
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 +0.3 -0.5 +0.0 +0.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.5 -0.3 -0.2 -0.4
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.5 +0.1 +0.0 -0.2 -0.4
survival Survival; Treatment=UGA synthetic gw pH3.9; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 -0.3 +0.5 +0.2 -0.2
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 +0.3 -0.2 -0.2 -0.3
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.5 -0.1 -0.5 +0.2 +0.0
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.4 +0.4 -0.2 -0.2 -0.3
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 -0.3 -0.2 -0.0 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 +0.1 +0.1 -0.1 -0.4
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.6 +0.1 -0.2 +0.1 -0.4
stress copper (II) chloride 2 uM, anaerobic +0.5 -0.1 -0.2 +0.2 -0.1
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 +0.3 +0.3 +0.1 -0.3
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -0.3 +0.6 +0.2 +0.1
stress copper (II) chloride 2 uM, anaerobic +0.2 +0.2 +0.5 -0.3 +0.2
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 +0.4 +0.7 -0.2 -0.2
stress Uranyl Acetate Dihydrate 200 uM, aerobic +0.5 +0.1 +0.1 +0.3 +0.3
carbon source Ying_OrganicAcid7 rep B; time point 3 +0.1 +0.2 +0.4 +0.5 +0.1
stress copper (II) chloride 2 uM, anaerobic -0.4 -0.1 +0.5 +0.4 +1.0
carbon source Ying_OrganicAcid7 rep C; time point 3 +0.2 +0.3 +0.3 +0.3 +0.2
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IAI47_13000
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IAI47_13015
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