Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_12915 and IAI47_12920 are separated by 520 nucleotidesIAI47_12920 and IAI47_12925 are separated by 143 nucleotidesIAI47_12925 and IAI47_12930 overlap by 1 nucleotidesIAI47_12930 and IAI47_12935 are separated by 33 nucleotides IAI47_12915: IAI47_12915 - leucine-responsive transcriptional regulator Lrp, at 2,731,261 to 2,731,755 _12915 IAI47_12920: IAI47_12920 - thioredoxin-disulfide reductase, at 2,732,276 to 2,733,244 _12920 IAI47_12925: IAI47_12925 - cysteine/glutathione ABC transporter permease/ATP-binding protein CydD, at 2,733,388 to 2,735,157 _12925 IAI47_12930: IAI47_12930 - cysteine/glutathione ABC transporter ATP-binding protein/permease CydC, at 2,735,157 to 2,736,887 _12930 IAI47_12935: IAI47_12935 - leucyl/phenylalanyl-tRNA--protein transferase, at 2,736,921 to 2,737,613 _12935
Group Condition IAI47_12915 IAI47_12920 IAI47_12925 IAI47_12930 IAI47_12935
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -0.5 -4.2 -4.5 -0.5
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 -0.5 -4.5 -4.1 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -1.8 -3.7 -3.7 -0.0
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 -1.1 -3.7 -3.4 -0.4
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -0.7 -3.6 -3.9 -0.3
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -0.9 -2.6 -4.2 -0.1
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -0.4 -3.6 -3.4 -0.4
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.1 -4.1 -3.7 +0.1
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 +0.4 -3.5 -3.9 -0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50 +1.1 -1.3 -3.0 -3.9 -0.3
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 +0.1 -3.8 -4.0 -0.0
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.5 -1.2 -2.7 -3.1 -0.2
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 +0.6 -3.3 -3.9 -0.0
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50 +1.6 -1.2 -3.2 -3.5 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50 +1.6 -1.0 -3.6 -2.7 -0.5
carbon source Ying_sugar7 rep B; time point 3 -4.4 -1.7 +1.6 +0.7 -1.6
carbon source Ying_sugar7 rep A; time point 3 -4.4 -1.9 +0.9 +0.9 -0.7
carbon source Ying_OrganicAcid7 rep A; time point 3 -3.9 -2.4 +0.7 +0.6 -0.3
carbon source Ying_Nucleobase14 rep B; time point 3 -4.3 -2.6 +1.4 +0.7 -0.3
carbon source Ying_Nucleobase14 rep C; time point 3 -4.1 -2.3 +1.2 +0.5 -0.2
carbon source Ying_sugar7 rep C; time point 3 -4.5 -1.2 +1.0 +0.9 -1.0
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50 +1.5 -1.1 -3.7 -1.5 +0.0
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50 +1.6 -0.7 -2.8 -2.8 -0.0
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50 +1.6 -0.6 -2.5 -2.9 -0.1
carbon source Ying_Nucleobase14 rep B; time point 2 -3.8 -2.3 +1.0 +0.6 -0.1
carbon source Ying_Nucleobase14 rep A; time point 3 -4.2 -2.2 +1.5 +0.9 -0.3
carbon source Ying_sugar7 rep A; time point 2 -4.3 -1.1 +1.2 +0.9 -0.4
carbon source Ying_Others16 rep B; time point 3 -3.1 -1.9 +1.4 +0.8 -0.5
carbon source Ying_sugar7 rep B; time point 2 -4.5 -1.4 +1.8 +1.4 -0.2
carbon source Ying_sugar7 rep C; time point 2 -3.6 -1.1 +1.1 +1.6 -0.2
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IAI47_12915
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IAI47_12920
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IAI47_12930
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IAI47_12935
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