Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_12775 and IAI47_12780 are separated by 185 nucleotidesIAI47_12780 and IAI47_12785 are separated by 147 nucleotidesIAI47_12785 and IAI47_12790 overlap by 4 nucleotidesIAI47_12790 and IAI47_12795 overlap by 20 nucleotides IAI47_12775: IAI47_12775 - YcbK family protein, at 2,691,115 to 2,691,663 _12775 IAI47_12780: IAI47_12780 - L,D-transpeptidase, at 2,691,849 to 2,693,660 _12780 IAI47_12785: IAI47_12785 - chromosome partition protein MukB, at 2,693,808 to 2,698,295 _12785 IAI47_12790: IAI47_12790 - chromosome partition protein MukE, at 2,698,292 to 2,699,017 _12790 IAI47_12795: IAI47_12795 - chromosome partition protein MukF, at 2,698,998 to 2,700,320 _12795
Group Condition IAI47_12775 IAI47_12780 IAI47_12785 IAI47_12790 IAI47_12795
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.6 -0.6 N.D. -4.1 N.D.
stress Cobalt chloride 10 uM, aerobic -0.1 -0.3 N.D. -4.5 N.D.
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 -0.2 N.D. -4.2 N.D.
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.7 -0.1 N.D. -4.1 N.D.
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -0.0 N.D. -4.0 N.D.
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50 -0.0 -0.5 N.D. -3.6 N.D.
stress copper (II) chloride 2 uM, anaerobic -0.2 -0.0 N.D. -3.9 N.D.
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 -0.3 N.D. -3.6 N.D.
carbon source Ying_sugar7 rep C; time point 2 +0.1 +0.2 N.D. -4.0 N.D.
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 +0.2 N.D. -3.7 N.D.
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 +0.1 N.D. -3.6 N.D.
nitrogen source nitrogen source nitrate 20mM +0.7 -0.4 N.D. -3.9 N.D.
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -0.2 N.D. -3.2 N.D.
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 -0.0 N.D. -3.3 N.D.
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 +0.0 N.D. -3.2 N.D.
carbon source Ying_sugar7 rep A; time point 2 +0.3 -0.5 N.D. -3.1 N.D.
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -0.0 N.D. -3.1 N.D.
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 +0.1 N.D. -3.3 N.D.
carbon source Ying_Nucleobase14 rep C; time point 1 +0.2 -0.3 N.D. -3.1 N.D.
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 +0.2 N.D. -3.1 N.D.
carbon source Ying_AminoAcid20 rep C; time point 2 +0.4 -0.3 N.D. -3.1 N.D.
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.1 N.D. -3.1 N.D.
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 +0.2 N.D. -3.1 N.D.
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 +0.3 N.D. -2.8 N.D.
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.3 +0.3 N.D. -2.8 N.D.
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 +0.3 N.D. -2.8 N.D.
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 +0.2 N.D. -2.9 N.D.
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.1 N.D. -2.9 N.D.
nitrogen source nitrogen source nitrite 1mM +0.7 -0.9 N.D. +1.5 N.D.
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50 -0.2 -0.3 N.D. +3.0 N.D.
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