Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_12740 and IAI47_12745 are separated by 73 nucleotidesIAI47_12745 and IAI47_12750 are separated by 243 nucleotidesIAI47_12750 and IAI47_12755 are separated by 156 nucleotidesIAI47_12755 and IAI47_12760 are separated by 302 nucleotides IAI47_12740: IAI47_12740 - aliphatic sulfonates ABC transporter ATP-binding protein, at 2,681,049 to 2,681,837 _12740 IAI47_12745: IAI47_12745 - aminopeptidase N, at 2,681,911 to 2,684,526 _12745 IAI47_12750: IAI47_12750 - nicotinate phosphoribosyltransferase, at 2,684,770 to 2,685,975 _12750 IAI47_12755: IAI47_12755 - asparagine--tRNA ligase, at 2,686,132 to 2,687,532 _12755 IAI47_12760: IAI47_12760 - porin OmpF, at 2,687,835 to 2,688,956 _12760
Group Condition IAI47_12740 IAI47_12745 IAI47_12750 IAI47_12755 IAI47_12760
carbon source Ying_Others16 rep A; time point 3 -0.3 +0.2 -0.2 N.D. -3.6
carbon source Ying_Others16 rep C; time point 3 -0.1 +0.1 -0.1 N.D. -3.6
carbon source Ying_Others16 rep B; time point 3 +0.0 +0.1 -0.1 N.D. -3.8
carbon source Ying_Others16 rep A; time point 2 -0.2 +0.2 -0.0 N.D. -3.2
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 +0.0 -0.1 N.D. -2.4
carbon source Ying_Others16 rep B; time point 2 +0.2 +0.1 -0.1 N.D. -3.0
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.1 -0.2 N.D. -2.5
carbon source Ying_Others16 rep C; time point 2 +0.3 +0.1 -0.0 N.D. -2.9
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 +0.4 -0.1 N.D. -2.2
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 -0.1 -0.1 N.D. -2.0
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 -0.2 +0.1 N.D. -1.5
carbon source Ying_Others16 rep B; time point 1 -0.4 +0.2 -0.0 N.D. -1.7
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 -0.1 +0.1 N.D. -1.8
carbon source Ying_OrganicAcid7 rep C; time point 3 +0.2 -0.1 +0.2 N.D. -1.8
carbon source Ying_Others16 rep C; time point 1 +0.2 +0.2 -0.1 N.D. -1.9
survival Survival; Treatment=FW106 (pH3.9); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.3 -0.1 +0.8 N.D. -1.8
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.0 +0.4 -0.1 N.D. -0.7
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.5 +0.1 -0.1 N.D. -1.8
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.5 +0.0 -0.4 N.D. -1.4
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.4 +0.4 -0.1 N.D. -1.1
carbon source Ying_Others16 rep A; time point 1 +0.3 +0.3 +0.0 N.D. -1.7
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.7 +0.2 -0.1 N.D. -1.7
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.5 +0.5 N.D. -1.0
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.8 -0.2 -0.1 N.D. +1.6
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.4 -0.3 -0.3 N.D. +2.2
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.4 -0.1 +0.3 N.D. +1.6
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 -0.1 +0.2 N.D. +2.0
stress copper (II) chloride 2 uM, anaerobic +0.2 -0.0 -0.2 N.D. +4.0
stress copper (II) chloride 2 uM, anaerobic +0.5 +0.3 -0.2 N.D. +4.1
stress copper (II) chloride 2 uM, anaerobic +0.0 -0.0 +0.1 N.D. +5.8
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