Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_12605 and IAI47_12610 are separated by 176 nucleotidesIAI47_12610 and IAI47_12615 are separated by 69 nucleotidesIAI47_12615 and IAI47_12620 are separated by 1 nucleotidesIAI47_12620 and IAI47_12625 are separated by 123 nucleotides IAI47_12605: IAI47_12605 - CoA-binding protein, at 2,650,999 to 2,651,412 _12605 IAI47_12610: IAI47_12610 - DUF2057 family protein, at 2,651,589 to 2,652,230 _12610 IAI47_12615: IAI47_12615 - methylglyoxal synthase, at 2,652,300 to 2,652,758 _12615 IAI47_12620: IAI47_12620 - DNA helicase IV, at 2,652,760 to 2,654,814 _12620 IAI47_12625: IAI47_12625 - YccF domain-containing protein, at 2,654,938 to 2,655,378 _12625
Group Condition IAI47_12605 IAI47_12610 IAI47_12615 IAI47_12620 IAI47_12625
nitrogen source nitrogen source Ammonium chloride 20mM -0.1 -0.4 -1.2 +0.0 -0.2
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -0.1 -0.1 -0.0 -1.3
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.2 -0.1 +0.1 -1.3
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 -0.1 -0.5 +0.0 -0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50 -0.7 +0.3 -0.4 -0.0 -0.5
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -0.0 +0.1 +0.0 -1.2
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.6 +0.1 -0.5 -0.0 -0.3
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 +0.3 -0.1 -0.0 -1.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50 -0.7 +0.2 -0.3 -0.1 -0.3
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.4 -0.4 -0.1 -1.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.6 +0.1 -0.3 +0.0 -0.3
survival Survival; Treatment=FW106 (pH3.9); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.3 -0.6 +0.7 -0.2 -0.7
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.1 +0.2 -0.2 -1.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50 -0.5 +0.1 -0.3 +0.1 -0.5
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 +0.3 -0.6 -0.1 -0.4
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50 -0.8 +0.4 -0.2 -0.0 -0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50 -0.7 +0.3 -0.2 +0.1 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50 -0.9 +0.3 -0.1 -0.1 -0.0
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.5 +0.1 -0.0 -1.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50 -0.7 +0.3 +0.1 -0.1 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 +0.4 +0.2 -0.2 -0.8
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.8 +0.4 -0.2 -0.1 +0.2
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 -0.6 -0.4 +0.1 +0.3
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 +0.3 -0.2 +0.2 -0.7
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 +0.3 -0.1 +0.4 -0.5
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 -0.5 -0.4 +0.1 +0.4
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 +0.2 +0.4 -0.3 +0.2
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 +0.1 -0.4 +0.2 +0.3
stress copper (II) chloride 5 uM, aerobic +0.0 -0.2 +0.1 +0.4 +0.7
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 +0.1 +0.8 +0.2 +0.1
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IAI47_12605
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IAI47_12610
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IAI47_12625
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