Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_12580 and IAI47_12585 are separated by 105 nucleotidesIAI47_12585 and IAI47_12590 are separated by 0 nucleotidesIAI47_12590 and IAI47_12595 are separated by 85 nucleotidesIAI47_12595 and IAI47_12600 are separated by 73 nucleotides IAI47_12580: IAI47_12580 - FtsH protease modulator YccA, at 2,647,934 to 2,648,587 _12580 IAI47_12585: IAI47_12585 - sulfurtransferase TusE, at 2,648,693 to 2,649,019 _12585 IAI47_12590: IAI47_12590 - acylphosphatase, at 2,649,020 to 2,649,298 _12590 IAI47_12595: IAI47_12595 - 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI, at 2,649,384 to 2,650,574 _12595 IAI47_12600: IAI47_12600 - heat shock protein HspQ, at 2,650,648 to 2,650,965 _12600
Group Condition IAI47_12580 IAI47_12585 IAI47_12590 IAI47_12595 IAI47_12600
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 N.D. -1.2 -0.3 +0.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 N.D. -0.5 +0.1 -0.5
carbon source Ying_all64 rep B; time point 2 +0.1 N.D. -0.4 -0.2 -0.3
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 N.D. -0.5 -0.1 -0.3
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 N.D. -0.7 +0.2 +0.2
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.4 N.D. -0.2 +0.1 -0.3
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.5 N.D. -0.5 +0.3 -0.1
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.5 N.D. -0.1 +0.2 -0.3
survival Survival; Treatment=FW106 (pH3.9); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 N.D. +0.9 -0.2 -0.5
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 N.D. -0.2 +0.4 +0.2
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 N.D. -0.2 +0.6 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50 +0.4 N.D. -0.3 +0.0 +0.5
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 N.D. +0.4 +0.5 -0.2
stress copper (II) chloride 2 uM, anaerobic -0.3 N.D. +0.5 +0.1 +0.6
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 N.D. +0.6 +0.2 -0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50 +0.3 N.D. -0.0 +0.1 +0.5
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 N.D. -0.3 +0.1 +0.7
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.6 N.D. +0.2 +0.4 -0.2
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.5 N.D. -0.1 -0.0 +0.5
stress copper (II) chloride 2 uM, anaerobic -0.2 N.D. +0.6 +0.2 +0.4
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 N.D. -0.2 +0.0 +0.8
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 N.D. +0.7 +0.3 +0.0
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 N.D. +0.1 +0.3 +0.5
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 N.D. +0.4 +0.3 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 N.D. +0.5 +0.2 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50 +0.6 N.D. +0.3 +0.2 +0.0
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.4 N.D. -0.0 +0.2 +0.5
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.5 N.D. +0.5 +0.2 -0.0
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 N.D. +0.4 +0.3 +0.5
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.4 N.D. -0.0 +0.3 +0.9
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IAI47_12580
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IAI47_12585
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IAI47_12600
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