Fitness for 5 genes in Pantoea sp. MT58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 309 experiments or choose conditions or try the comparative fitness browser

500 ntIAI47_12450 and IAI47_12455 are separated by 40 nucleotidesIAI47_12455 and IAI47_12460 are separated by 152 nucleotidesIAI47_12460 and IAI47_12465 are separated by 69 nucleotidesIAI47_12465 and IAI47_12470 overlap by 8 nucleotides IAI47_12450: IAI47_12450 - tRNA-Cys, at 2,625,681 to 2,625,754 _12450 IAI47_12455: IAI47_12455 - tRNA-Gly, at 2,625,795 to 2,625,870 _12455 IAI47_12460: IAI47_12460 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, at 2,626,023 to 2,626,571 _12460 IAI47_12465: IAI47_12465 - excinuclease ABC subunit UvrC, at 2,626,641 to 2,628,473 _12465 IAI47_12470: IAI47_12470 - UvrY/SirA/GacA family response regulator transcription factor, at 2,628,466 to 2,629,125 _12470
Group Condition IAI47_12450 IAI47_12455 IAI47_12460 IAI47_12465 IAI47_12470
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. N.D. +0.2 -4.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. N.D. +0.1 -3.9
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. N.D. +0.2 -3.9
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. N.D. +0.1 -3.7
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. N.D. +0.0 -3.4
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. N.D. +0.0 -3.3
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. N.D. +0.0 -3.0
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. N.D. +0.1 -3.0
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. N.D. -0.1 -2.8
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50 N.D. N.D. N.D. -0.2 -2.6
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. N.D. +0.0 -2.7
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. N.D. -0.0 -2.6
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. N.D. +0.1 -2.7
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. N.D. +0.2 -2.7
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50 N.D. N.D. N.D. -0.0 -2.5
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50 N.D. N.D. N.D. +0.1 -2.6
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. N.D. +0.1 -2.5
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50 N.D. N.D. N.D. -0.0 -2.5
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. N.D. +0.3 -2.7
carbon source Ying_all64 rep B; time point 3 N.D. N.D. N.D. -0.2 -2.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50 N.D. N.D. N.D. -0.0 -2.3
carbon source Ying_Others16 rep A; time point 3 N.D. N.D. N.D. -0.0 -2.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50 N.D. N.D. N.D. -0.0 -2.2
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. N.D. -0.0 -2.2
carbon source Ying_Others16 rep B; time point 3 N.D. N.D. N.D. +0.0 -2.2
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. N.D. N.D. -0.1 -2.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50 N.D. N.D. N.D. +0.1 -2.2
carbon source Ying_Others16 rep C; time point 2 N.D. N.D. N.D. +0.1 -2.2
carbon source Ying_Others16 rep B; time point 2 N.D. N.D. N.D. +0.1 -2.1
carbon source Ying_Others16 rep C; time point 3 N.D. N.D. N.D. +0.2 -2.0
remove
IAI47_12450
plot		 remove
IAI47_12455
plot		 remove
IAI47_12460		 remove
IAI47_12465
plot		 remove
IAI47_12470
plot