Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_12185 and IAI47_12190 are separated by 121 nucleotidesIAI47_12190 and IAI47_12195 are separated by 1 nucleotidesIAI47_12195 and IAI47_12200 are separated by 16 nucleotidesIAI47_12200 and IAI47_12205 are separated by 299 nucleotides IAI47_12185: IAI47_12185 - murein biosynthesis integral membrane protein MurJ, at 2,578,154 to 2,579,692 _12185 IAI47_12190: IAI47_12190 - Gfo/Idh/MocA family oxidoreductase, at 2,579,814 to 2,580,734 _12190 IAI47_12195: IAI47_12195 - DUF480 domain-containing protein, at 2,580,736 to 2,581,374 _12195 IAI47_12200: IAI47_12200 - ribosomal protein S5-alanine N-acetyltransferase, at 2,581,391 to 2,581,981 _12200 IAI47_12205: IAI47_12205 - glutaredoxin 2, at 2,582,281 to 2,582,928 _12205
Group Condition IAI47_12185 IAI47_12190 IAI47_12195 IAI47_12200 IAI47_12205
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -0.6 -1.4 -0.2 +0.0
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 N.D. -0.9 -0.9 +0.2 -0.2
stress copper (II) chloride 2 uM, anaerobic N.D. -0.2 -0.6 -0.3 -0.5
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. +0.1 -1.1 -0.2 -0.3
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -0.7 -0.5 -0.2 -0.1
survival Survival; Treatment=FW106 (pH3.9); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. -0.9 -0.8 +0.2 +0.1
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -0.5 -0.3 -0.2 -0.2
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. -1.0 -0.1 +0.2 -0.0
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. -0.3 -0.6 +0.4 -0.4
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -0.4 -0.1 -0.5 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 N.D. -0.2 -0.8 +0.3 -0.0
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -0.2 -0.7 +0.2 -0.1
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -0.2 -0.6 -0.2 +0.3
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. -0.2 -1.0 +0.6 -0.0
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 N.D. -0.7 -0.1 +0.4 -0.0
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. +0.3 -0.8 +0.2 -0.2
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. +0.6 -0.9 -0.2 +0.1
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. +0.5 -0.6 +0.0 -0.3
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. -0.9 +0.4 +0.1 +0.3
stress copper (II) chloride 2 uM, anaerobic N.D. +0.5 -0.6 +0.1 +0.1
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. +0.5 -0.6 +0.1 +0.2
stress Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic N.D. -0.6 +0.4 +0.1 +0.2
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. +0.7 -0.4 -0.2 +0.1
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. +0.1 +0.7 -0.3 -0.3
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. +0.3 +0.2 -0.4 +0.3
carbon source Ying_sugar7 rep C; time point 3 N.D. +0.3 +0.5 +0.3 -0.2
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. +0.1 +0.7 +0.4 -0.3
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. +0.0 +0.8 +0.3 +0.1
carbon source Ying_OrganicAcid7 rep C; time point 3 N.D. +0.3 +0.9 -0.1 +0.1
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. +0.0 +0.7 +0.1 +0.4
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