Fitness for 5 genes in Pantoea sp. MT58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 309 experiments or choose conditions or try the comparative fitness browser

500 ntIAI47_12055 and IAI47_12060 are separated by 91 nucleotidesIAI47_12060 and IAI47_12065 are separated by 85 nucleotidesIAI47_12065 and IAI47_12070 are separated by 154 nucleotidesIAI47_12070 and IAI47_12075 are separated by 10 nucleotides IAI47_12055: IAI47_12055 - aminodeoxychorismate lyase, at 2,553,024 to 2,553,839 _12055 IAI47_12060: IAI47_12060 - beta-ketoacyl-ACP synthase II, at 2,553,931 to 2,555,172 _12060 IAI47_12065: IAI47_12065 - acyl carrier protein, at 2,555,258 to 2,555,494 _12065 IAI47_12070: IAI47_12070 - 3-oxoacyl-ACP reductase FabG, at 2,555,649 to 2,556,383 _12070 IAI47_12075: IAI47_12075 - ACP S-malonyltransferase, at 2,556,394 to 2,557,326 _12075
Group Condition IAI47_12055 IAI47_12060 IAI47_12065 IAI47_12070 IAI47_12075
stress Cadmium acetate 8 uM, aerobic -0.4 -3.3 N.D. N.D. N.D.
no stress control Defined media control, aerobic -0.4 -3.3 N.D. N.D. N.D.
nitrogen source Ammonium chloride (N) -0.8 -2.7 N.D. N.D. N.D.
carbon source Ying_all64 rep C; time point 3 -0.2 -3.0 N.D. N.D. N.D.
stress Cadmium acetate 8 uM, aerobic -0.4 -2.8 N.D. N.D. N.D.
stress Cobalt chloride 10 uM, aerobic -0.5 -2.4 N.D. N.D. N.D.
carbon source Ying_all64 rep B; time point 3 -0.0 -2.9 N.D. N.D. N.D.
carbon source Ying_all64 rep A; time point 3 -0.1 -2.9 N.D. N.D. N.D.
carbon source Ying_all64 rep C; time point 2 -0.0 -2.9 N.D. N.D. N.D.
carbon source Ying_sugar7 rep A; time point 2 -0.2 -2.6 N.D. N.D. N.D.
stress Uranyl Acetate Dihydrate 200 uM, aerobic -0.5 -2.3 N.D. N.D. N.D.
carbon source Ying_all64 rep A; time point 2 +0.0 -2.6 N.D. N.D. N.D.
carbon source Ying_sugar7 rep B; time point 3 -0.3 -2.3 N.D. N.D. N.D.
no stress control Defined media control, aerobic -0.3 -2.3 N.D. N.D. N.D.
no stress control Defined media control, aerobic -0.4 -2.1 N.D. N.D. N.D.
stress Cobalt chloride 10 uM, aerobic -0.3 -2.2 N.D. N.D. N.D.
carbon source Ying_all64 rep B; time point 2 +0.1 -2.6 N.D. N.D. N.D.
carbon source Ying_sugar7 rep C; time point 3 -0.3 -2.2 N.D. N.D. N.D.
no stress control Defined media control, aerobic -0.6 -1.9 N.D. N.D. N.D.
stress copper (II) chloride 5 uM, aerobic -0.8 -1.7 N.D. N.D. N.D.
carbon source Ying_sugar7 rep B; time point 2 -0.0 -2.4 N.D. N.D. N.D.
no stress control Defined media control, aerobic -0.4 -2.1 N.D. N.D. N.D.
stress Manganese (II) chloride tetrahydrate 50 uM, aerobic -0.3 -2.0 N.D. N.D. N.D.
stress Manganese (II) chloride tetrahydrate 50 uM, aerobic -0.6 -1.7 N.D. N.D. N.D.
carbon source Ying_sugar7 rep C; time point 2 -0.5 -1.8 N.D. N.D. N.D.
carbon source Ying_sugar7 rep A; time point 3 -0.3 -2.0 N.D. N.D. N.D.
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50 -0.3 +2.3 N.D. N.D. N.D.
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +2.1 N.D. N.D. N.D.
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 +2.0 N.D. N.D. N.D.
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +2.3 N.D. N.D. N.D.
remove
IAI47_12055
plot
remove
IAI47_12060
plot
remove
IAI47_12065
remove
IAI47_12070
plot
remove
IAI47_12075
plot