Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_12035 and IAI47_12040 are separated by 18 nucleotidesIAI47_12040 and IAI47_12045 overlap by 1 nucleotidesIAI47_12045 and IAI47_12050 overlap by 11 nucleotidesIAI47_12050 and IAI47_12055 overlap by 4 nucleotides IAI47_12035: IAI47_12035 - metal-dependent hydrolase, at 2,549,587 to 2,550,378 _12035 IAI47_12040: IAI47_12040 - DNA polymerase III subunit delta', at 2,550,397 to 2,551,386 _12040 IAI47_12045: IAI47_12045 - dTMP kinase, at 2,551,386 to 2,552,018 _12045 IAI47_12050: IAI47_12050 - cell division protein YceG, at 2,552,008 to 2,553,027 _12050 IAI47_12055: IAI47_12055 - aminodeoxychorismate lyase, at 2,553,024 to 2,553,839 _12055
Group Condition IAI47_12035 IAI47_12040 IAI47_12045 IAI47_12050 IAI47_12055
stress Nickel (II) chloride 40 uM, aerobic -0.0 N.D. N.D. -1.1 -1.1
stress Nickel (II) chloride 40 uM, aerobic -0.1 N.D. N.D. -1.0 -1.1
stress copper (II) chloride 5 uM, aerobic -0.0 N.D. N.D. -1.3 -0.8
stress Nickel (II) chloride 40 uM, aerobic +0.0 N.D. N.D. -1.1 -0.9
stress copper (II) chloride 5 uM, aerobic -0.1 N.D. N.D. -0.8 -0.8
stress copper (II) chloride 5 uM, aerobic +0.1 N.D. N.D. -0.9 -0.8
stress copper (II) chloride 2 uM, anaerobic -0.3 N.D. N.D. -0.7 -0.4
carbon source Ying_Others16 rep C; time point 3 +0.2 N.D. N.D. +0.1 -1.5
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.3 N.D. N.D. -0.6 -0.3
carbon source Ying_Others16 rep B; time point 3 +0.4 N.D. N.D. +0.2 -1.7
stress Nickel (II) chloride 20 uM, anaerobic -0.1 N.D. N.D. -0.2 -0.8
carbon source Ying_Others16 rep A; time point 3 +0.2 N.D. N.D. +0.1 -1.4
stress Manganese (II) chloride tetrahydrate 50 uM, anaerobic -0.4 N.D. N.D. -0.0 -0.6
carbon source Ying_Others16 rep C; time point 2 -0.1 N.D. N.D. +0.1 -1.1
carbon source Ying_Others16 rep A; time point 2 +0.1 N.D. N.D. +0.2 -1.2
stress Uranyl Acetate Dihydrate 200 uM, anaerobic -0.2 N.D. N.D. +0.1 -0.8
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.3 N.D. N.D. -0.7 +0.1
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 N.D. N.D. -0.6 -0.4
stress dichromate 5 uM, aerobic -0.1 N.D. N.D. +0.2 -0.8
no stress control Defined media control, anaerobic +0.2 N.D. N.D. -0.0 -0.9
stress copper (II) chloride 2 uM, anaerobic -0.4 N.D. N.D. -0.6 +0.3
stress Manganese (II) chloride tetrahydrate 50 uM, anaerobic -0.1 N.D. N.D. +0.1 -0.8
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 N.D. N.D. +0.4 -0.7
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 N.D. N.D. +0.3 -0.5
carbon source Ying_Others16 rep B; time point 2 +0.2 N.D. N.D. +0.3 -1.0
carbon source Ying_Others16 rep A; time point 1 +0.2 N.D. N.D. +0.2 -0.7
carbon source Ying_Others16 rep C; time point 1 +0.2 N.D. N.D. +0.2 -0.6
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 N.D. N.D. -0.4 +0.5
carbon source Ying_sugar7 rep C; time point 2 +0.4 N.D. N.D. +0.5 -0.5
nitrogen source nitrogen source nitrate 5mM -0.1 N.D. N.D. +0.9 -0.0
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