Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_11670 and IAI47_11675 are separated by 16 nucleotidesIAI47_11675 and IAI47_11680 are separated by 14 nucleotidesIAI47_11680 and IAI47_11685 are separated by 3 nucleotidesIAI47_11685 and IAI47_11690 are separated by 20 nucleotides IAI47_11670: IAI47_11670 - type VI secretion system protein TssA, at 2,471,887 to 2,472,903 _11670 IAI47_11675: IAI47_11675 - type VI secretion system-associated protein TagF, at 2,472,920 to 2,473,636 _11675 IAI47_11680: IAI47_11680 - type VI secretion system membrane subunit TssM, at 2,473,651 to 2,477,280 _11680 IAI47_11685: IAI47_11685 - DotU family type VI secretion system protein, at 2,477,284 to 2,478,519 _11685 IAI47_11690: IAI47_11690 - type VI secretion system baseplate subunit TssK, at 2,478,540 to 2,479,880 _11690
Group Condition IAI47_11670 IAI47_11675 IAI47_11680 IAI47_11685 IAI47_11690
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -0.9 -0.7 -1.4 -0.9
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 -0.9 -0.6 -1.3 -1.1
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.5 -1.3 -0.6 -1.1 -1.3
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.9 -0.7 -1.2 -1.0
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -1.0 -0.6 -1.1 -0.7
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -0.7 -0.5 -1.0 -1.0
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.7 -0.8 -0.4 -1.0 -0.2
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.5 -0.9 -0.6 -1.3 -0.8
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.6 -0.7 -1.0 -0.9
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 -0.9 -0.5 -0.9 -0.7
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.6 -0.8 -1.1 -0.6
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.6 -0.5 -1.1 -0.7
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.5 -0.8 -0.7 -1.2 -0.7
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -0.6 -0.5 -1.0 -0.7
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.9 -0.5 -1.2 -0.5
stress Uranyl Acetate Dihydrate 200 uM, aerobic +0.1 -0.6 -0.6 -1.3 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 -0.6 -0.6 -0.7 -0.4
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.9 -0.5 -1.1 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.9 -0.3 -0.8 -0.5
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 -0.5 -0.5 -1.0 -0.6
stress copper (II) chloride 2 uM, anaerobic -1.0 -0.5 -0.0 -0.8 +0.4
survival Survival; Treatment=FW106 (pH3.9); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -1.0 -0.2 +0.2 -0.2 +1.1
nitrogen source TNT (N) -0.7 +0.6 +0.5 +0.7 +0.6
nitrogen source nitrogen source nitrate 5mM -0.1 +0.5 +0.5 +0.9 +0.9
nitrogen source nitrogen source nitrate 20mM -0.1 +0.5 +0.6 +0.8 +1.0
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.0 +1.1 +0.5 +0.8 +0.8
nitrogen source nitrogen source nitrite 0.5mM -0.2 +0.8 +1.0 +1.5 +0.9
nitrogen source nitrogen source nitrite 0.5mM -0.2 +1.1 +1.1 +1.5 +1.3
nitrogen source nitrogen source nitrite 1mM -0.3 +1.1 +1.1 +1.6 +1.3
nitrogen source nitrogen source nitrite 1mM +0.1 +1.3 +1.4 +1.9 +1.5
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IAI47_11670
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IAI47_11675
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IAI47_11690
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