Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_11585 and IAI47_11590 overlap by 4 nucleotidesIAI47_11590 and IAI47_11595 are separated by 2 nucleotidesIAI47_11595 and IAI47_11600 overlap by 11 nucleotidesIAI47_11600 and IAI47_11605 are separated by 16 nucleotides IAI47_11585: IAI47_11585 - type VI secretion system baseplate subunit TssG, at 2,456,985 to 2,458,031 _11585 IAI47_11590: IAI47_11590 - type VI secretion system baseplate subunit TssF, at 2,458,028 to 2,459,899 _11590 IAI47_11595: IAI47_11595 - type VI secretion system baseplate subunit TssE, at 2,459,902 to 2,460,477 _11595 IAI47_11600: IAI47_11600 - protein of avirulence locus ImpE, at 2,460,467 to 2,461,294 _11600 IAI47_11605: IAI47_11605 - hypothetical protein, at 2,461,311 to 2,462,291 _11605
Group Condition IAI47_11585 IAI47_11590 IAI47_11595 IAI47_11600 IAI47_11605
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 -0.3 -0.4 -0.6 -1.2
nitrogen source TNT (N) -0.1 -0.4 -0.2 -0.5 -1.3
nitrogen source TNT (N) -0.1 -0.4 -0.0 -0.7 -0.9
nitrogen source TNT (N) -0.2 -0.2 -0.1 -0.9 -0.7
nitrogen source Ammonium chloride (N) -0.3 -0.2 +0.6 -1.3 -0.4
survival Survival; Treatment=FW106 (pH3.9); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.4 -0.5 +0.4 -0.8 -0.1
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 -0.3 +0.5 -0.6 -0.7
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.6 -0.2 +0.7 -1.0 -0.9
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 -0.2 -0.2 -0.9 +0.4
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 +0.3 +0.3 -0.8 -0.6
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 -0.1 -0.2 +0.9 -0.7
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.6 +0.1 +0.7 -0.3 +0.4
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 +0.4 -0.2 -0.8 +1.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 +0.4 +0.4 +0.5 -0.4 +0.5
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 +0.5 +0.5 +0.5 +0.5
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50 -0.0 +0.2 +0.6 -0.2 +1.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50 +0.4 +0.2 +0.0 +0.7 +0.6
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.6 +0.5 +0.6 -0.2 +0.5
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.6 -0.1 +0.5 +0.4 +0.6
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.5 +0.3 +0.3 +0.3 +0.5
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.7 +0.3 +0.8 -0.2 +0.5
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.3 +0.3 +0.6 +0.8
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.6 +0.3 +0.9 +0.1 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.5 +0.2 +0.8 +0.1 +0.6
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50 +0.5 +0.4 +0.9 -0.0 +0.7
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 +0.5 +0.5 +0.3 +0.8
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.8 +0.4 +0.7 +0.4 +0.1
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 +0.3 +0.9 +0.5 +0.5
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.5 +0.3 +0.6 +0.4 +0.6
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.5 +0.3 +1.3 -0.1 +0.5
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IAI47_11585
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IAI47_11590
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IAI47_11600
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IAI47_11605
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