Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_11525 and IAI47_11530 overlap by 4 nucleotidesIAI47_11530 and IAI47_11535 are separated by 3 nucleotidesIAI47_11535 and IAI47_11540 are separated by 2 nucleotidesIAI47_11540 and IAI47_11545 are separated by 533 nucleotides IAI47_11525: IAI47_11525 - ADP-ribosylglycohydrolase family protein, at 2,438,369 to 2,439,460 _11525 IAI47_11530: IAI47_11530 - PAAR domain-containing protein, at 2,439,457 to 2,440,794 _11530 IAI47_11535: IAI47_11535 - DcrB-related protein, at 2,440,798 to 2,441,592 _11535 IAI47_11540: IAI47_11540 - type VI secretion system tip protein VgrG, at 2,441,595 to 2,443,544 _11540 IAI47_11545: IAI47_11545 - hypothetical protein, at 2,444,078 to 2,444,530 _11545
Group Condition IAI47_11525 IAI47_11530 IAI47_11535 IAI47_11540 IAI47_11545
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -0.1 -4.9 +0.3 -0.5
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -0.2 -2.2 -0.5 -0.7
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. +0.1 -2.7 -0.5 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50 N.D. -0.2 -0.5 -1.8 -0.8
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -0.5 -0.2 -1.5 -0.4
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. -0.1 -1.3 -1.0 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. -0.5 +0.6 -1.7 -1.0
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -0.4 -0.6 -1.3 -0.2
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. -0.2 -2.8 +0.3 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. -0.5 +0.4 -1.3 -1.0
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. -0.2 -2.0 -0.2 +0.0
carbon source Ying_Others16 rep A; time point 2 N.D. -0.0 -1.1 -0.7 -0.5
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. +0.3 -0.2 -1.8 -0.6
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. +0.0 -0.6 -1.4 -0.3
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. +0.1 -3.2 +0.5 +0.4
stress copper (II) chloride 2 uM, anaerobic N.D. -0.1 -0.8 -1.5 +0.4
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. -0.1 -1.0 -0.7 +0.5
carbon source Ying_all64 rep B; time point 2 N.D. -0.1 -1.9 +0.0 +0.7
stress copper (II) chloride 2 uM, anaerobic N.D. +0.2 -0.7 -1.3 +0.6
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. -0.1 +0.6 -1.6 +0.2
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 N.D. +0.1 -1.3 +0.8 -0.2
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. +0.2 +0.8 -0.2 -1.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50 N.D. -0.4 +1.0 -0.8 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. -0.3 +1.2 +0.0 -0.9
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. -0.2 +1.1 +0.3 -0.7
stress copper (II) chloride 2 uM, anaerobic N.D. +0.5 -0.8 +0.1 +1.0
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=6hrs; Outgrowth=LBkan50 N.D. -0.0 +1.2 +0.6 -0.5
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. +0.2 +1.7 -0.7 +0.2
stress Uranyl Acetate Dihydrate 200 uM, aerobic N.D. +0.1 +1.3 +0.8 -0.1
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 N.D. +0.2 +1.0 +1.0 +0.4
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