Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_11045 and IAI47_11050 are separated by 75 nucleotidesIAI47_11050 and IAI47_11055 are separated by 133 nucleotidesIAI47_11055 and IAI47_11060 are separated by 60 nucleotidesIAI47_11060 and IAI47_11065 are separated by 66 nucleotides IAI47_11045: IAI47_11045 - hypothetical protein, at 2,328,233 to 2,328,406 _11045 IAI47_11050: IAI47_11050 - multidrug effflux MFS transporter, at 2,328,482 to 2,329,669 _11050 IAI47_11055: IAI47_11055 - ammonia-dependent NAD(+) synthetase, at 2,329,803 to 2,330,627 _11055 IAI47_11060: IAI47_11060 - aromatic amino acid DMT transporter YddG, at 2,330,688 to 2,331,578 _11060 IAI47_11065: IAI47_11065 - excinuclease Cho, at 2,331,645 to 2,332,505 _11065
Group Condition IAI47_11045 IAI47_11050 IAI47_11055 IAI47_11060 IAI47_11065
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.0 +0.1 N.D. -0.5 -0.4
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=12hrs; Outgrowth=LBkan50 -0.8 +0.0 N.D. +0.0 -0.9
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.7 -0.1 N.D. -0.1 -0.5
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 +0.2 N.D. -0.7 -0.3
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.6 +0.4 N.D. -0.2 -0.9
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.0 +0.0 N.D. -0.1 -0.1
stress copper (II) chloride 2 uM, anaerobic -0.4 -0.3 N.D. -0.5 -0.0
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.4 N.D. -0.5 -0.4
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 -0.2 N.D. -0.4 -0.6
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=6hrs; Outgrowth=LBkan50 -0.8 -0.0 N.D. +0.3 -0.3
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.6 +0.1 N.D. +0.0 -0.5
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 +0.2 N.D. -0.3 -0.5
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.5 -0.2 N.D. -0.3 +0.2
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.3 N.D. -0.1 -0.6
nitrogen source Ammonium chloride (N) +0.1 +0.2 N.D. -0.4 -0.5
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.8 +0.5 N.D. -0.1 -0.3
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.4 +0.4 N.D. -0.2 -0.5
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 +0.2 N.D. -0.3 -0.6
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 -0.3 +0.3 N.D. -0.4 -0.2
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.8 +0.3 N.D. +0.0 -0.1
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 -0.4 N.D. -0.0 +0.3
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 +0.3 N.D. +0.1 -0.8
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 +0.0 N.D. +0.4 -0.3
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.5 +0.0 N.D. -0.1 -0.8
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50 +0.2 +0.3 N.D. +0.1 -0.7
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 -0.3 N.D. -0.2 +0.6
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.6 +0.3 N.D. -0.0 -0.4
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 +0.2 N.D. -0.3 +0.3
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.7 +0.1 N.D. +0.2 +0.2
stress copper (II) chloride 2 uM, anaerobic -0.1 +0.3 N.D. +0.3 +0.9
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