Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_10890 and IAI47_10895 are separated by 208 nucleotidesIAI47_10895 and IAI47_10905 are separated by 468 nucleotidesIAI47_10905 and IAI47_10910 are separated by 436 nucleotidesIAI47_10910 and IAI47_10915 are separated by 152 nucleotides IAI47_10890: IAI47_10890 - FAD-binding oxidoreductase, at 2,296,612 to 2,299,665 _10890 IAI47_10895: IAI47_10895 - AI-2E family transporter YdiK, at 2,299,874 to 2,300,989 _10895 IAI47_10905: IAI47_10905 - phosphoenolpyruvate synthase, at 2,301,458 to 2,303,842 _10905 IAI47_10910: IAI47_10910 - kinase/pyrophosphorylase, at 2,304,279 to 2,305,106 _10910 IAI47_10915: IAI47_10915 - 3-deoxy-7-phosphoheptulonate synthase, at 2,305,259 to 2,306,305 _10915
Group Condition IAI47_10890 IAI47_10895 IAI47_10905 IAI47_10910 IAI47_10915
carbon source Ying_Others16 rep B; time point 3 -2.0 +0.0 -1.8 -1.0 +0.2
carbon source Ying_Others16 rep C; time point 3 -1.9 +0.0 -1.5 -0.9 +0.2
carbon source Ying_Others16 rep A; time point 3 -1.8 -0.1 -1.4 -0.6 +0.3
carbon source Ying_AminoAcid20 rep A; time point 3 -0.5 -0.1 -2.7 -0.2 +0.3
carbon source Ying_AminoAcid20 rep B; time point 3 -0.6 +0.1 -2.8 +0.0 +0.2
carbon source Ying_AminoAcid20 rep C; time point 3 -0.5 -0.1 -2.6 -0.1 +0.2
carbon source Ying_Others16 rep B; time point 2 -1.4 +0.0 -1.1 -0.6 +0.3
carbon source Ying_Others16 rep C; time point 2 -1.4 +0.0 -0.9 -0.7 +0.3
carbon source Ying_OrganicAcid7 rep A; time point 3 -0.5 +0.0 -1.5 -0.3 -0.2
carbon source Ying_OrganicAcid7 rep C; time point 3 -0.6 -0.0 -1.5 -0.1 -0.0
carbon source Ying_Others16 rep A; time point 2 -1.2 -0.0 -0.9 -0.5 +0.3
carbon source Ying_OrganicAcid7 rep B; time point 3 -0.5 -0.1 -1.3 -0.1 -0.2
stress Uranyl Acetate Dihydrate 200 uM, aerobic -1.4 -0.2 +0.2 -0.1 -0.3
no stress control Defined media control, aerobic -1.2 -0.3 -0.0 -0.3 +0.1
no stress control Defined media control, aerobic -1.1 -0.4 +0.1 -0.2 -0.2
carbon source Ying_AminoAcid20 rep C; time point 2 -0.4 -0.0 -1.4 -0.1 +0.3
carbon source Ying_AminoAcid20 rep A; time point 2 -0.2 -0.0 -1.4 -0.1 +0.2
stress copper (II) chloride 5 uM, aerobic -1.2 +0.1 -0.1 -0.3 +0.1
carbon source Ying_Others16 rep A; time point 1 -0.8 -0.1 -0.4 -0.3 +0.3
carbon source Ying_sugar7 rep C; time point 2 -1.4 -0.0 -0.1 +0.3 +0.0
carbon source Ying_sugar7 rep B; time point 3 -1.2 -0.1 +0.1 -0.2 +0.2
carbon source Ying_AminoAcid20 rep B; time point 2 -0.3 +0.0 -1.3 -0.0 +0.3
stress Uranyl Acetate Dihydrate 200 uM, aerobic -0.9 -0.2 +0.2 -0.4 +0.1
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.6 -0.9 +0.4 -0.2 +0.2
carbon source Ying_sugar7 rep B; time point 2 -1.3 -0.0 +0.1 -0.0 +0.4
carbon source Ying_Others16 rep C; time point 1 -0.8 +0.2 -0.2 -0.4 +0.4
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 +0.1 +0.5 -0.4 +0.4
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 +0.4 +0.3 -0.4 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 +0.2 +0.6 -0.6 +0.8
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.0 +0.3 +0.8 -0.3 +0.7
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