Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_10755 and IAI47_10760 are separated by 183 nucleotidesIAI47_10760 and IAI47_10765 are separated by 50 nucleotidesIAI47_10765 and IAI47_10770 are separated by 116 nucleotidesIAI47_10770 and IAI47_10775 are separated by 120 nucleotides IAI47_10755: IAI47_10755 - DUF1289 domain-containing protein, at 2,273,748 to 2,273,987 _10755 IAI47_10760: IAI47_10760 - TetR/AcrR family transcriptional regulator, at 2,274,171 to 2,274,767 _10760 IAI47_10765: IAI47_10765 - alkene reductase, at 2,274,818 to 2,275,915 _10765 IAI47_10770: IAI47_10770 - lactoylglutathione lyase, at 2,276,032 to 2,276,439 _10770 IAI47_10775: IAI47_10775 - ribonuclease T, at 2,276,560 to 2,277,228 _10775
Group Condition IAI47_10755 IAI47_10760 IAI47_10765 IAI47_10770 IAI47_10775
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -4.2 +0.0 -0.0 -0.1 -0.4
stress Uranyl Acetate Dihydrate 200 uM, aerobic -2.5 -0.1 +0.1 +0.2 -1.5
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -1.3 -0.2 -0.0 +0.2 -1.9
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.2 -0.2 -0.0 -0.2 -1.3
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.9 +0.1 +0.3 -0.2 -0.9
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.1 -0.1 +0.1 +0.2 -1.7
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.8 +0.0 +0.0 -0.4 -1.5
stress Cadmium acetate 8 uM, aerobic -1.3 -0.1 +0.1 +0.0 -1.3
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.9 +0.3 +0.1 -0.4 -1.5
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.9 -0.0 +0.3 +0.1 -1.5
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 +0.2 +0.1 +0.1 -1.9
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -1.2 +0.3 +0.2 -0.1 -1.2
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.2 +0.4 +0.2 -0.3 -0.8
stress Manganese (II) chloride tetrahydrate 50 uM, aerobic +0.5 -0.3 +0.0 -0.1 -1.7
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -1.3 +0.8 +0.2 -0.1 -1.1
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.7 +0.5 -0.1 +0.1 -1.3
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -1.4 +0.2 +0.2 +0.2 -0.7
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.7 -0.1 +0.1 +0.0 -2.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -2.1 +0.8 +0.0 +0.1 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -2.6 +0.8 +0.6 +0.5 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -1.0 +0.5 +0.2 +0.2 -0.9
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.0 +0.7 +0.3 +0.0 -1.0
carbon source Ying_all64 rep B; time point 3 +0.7 +0.1 +0.1 -0.0 -1.7
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.3 +0.9 +0.2 +0.2 -0.5
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.9 -0.1 +0.1 +0.1 -1.4
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +1.0 +0.2 +0.0 +0.2 -1.2
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 +1.4 -0.3 +0.2 +0.3 -1.0
stress copper (II) chloride 2 uM, anaerobic +2.2 +0.4 -0.1 +0.2 -1.0
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.9 +0.7 +0.5 +0.4 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.8 +1.3 +0.6 +0.3 +0.0
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