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Protein
Homologs
Fitness for 5 genes in
Pantoea sp. MT58
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
IAI47_10755 and IAI47_10760 are separated by 183 nucleotides
IAI47_10760 and IAI47_10765 are separated by 50 nucleotides
IAI47_10765 and IAI47_10770 are separated by 116 nucleotides
IAI47_10770 and IAI47_10775 are separated by 120 nucleotides
IAI47_10755: IAI47_10755 - DUF1289 domain-containing protein, at 2,273,748 to 2,273,987
_10755
IAI47_10760: IAI47_10760 - TetR/AcrR family transcriptional regulator, at 2,274,171 to 2,274,767
_10760
IAI47_10765: IAI47_10765 - alkene reductase, at 2,274,818 to 2,275,915
_10765
IAI47_10770: IAI47_10770 - lactoylglutathione lyase, at 2,276,032 to 2,276,439
_10770
IAI47_10775: IAI47_10775 - ribonuclease T, at 2,276,560 to 2,277,228
_10775
Group
Condition
IAI47
_10755
IAI47
_10760
IAI47
_10765
IAI47
_10770
IAI47
_10775
survival
Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
-4.2
+0.0
-0.0
-0.1
-0.4
stress
Uranyl Acetate Dihydrate 200 uM, aerobic
-2.5
-0.1
+0.1
+0.2
-1.5
survival
Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-1.3
-0.2
-0.0
+0.2
-1.9
survival
Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-1.2
-0.2
-0.0
-0.2
-1.3
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
-1.9
+0.1
+0.3
-0.2
-0.9
survival
Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-1.1
-0.1
+0.1
+0.2
-1.7
survival
Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.8
+0.0
+0.0
-0.4
-1.5
stress
Cadmium acetate 8 uM, aerobic
-1.3
-0.1
+0.1
+0.0
-1.3
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-0.9
+0.3
+0.1
-0.4
-1.5
survival
Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.9
-0.0
+0.3
+0.1
-1.5
survival
Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.5
+0.2
+0.1
+0.1
-1.9
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-1.2
+0.3
+0.2
-0.1
-1.2
survival
Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-1.2
+0.4
+0.2
-0.3
-0.8
stress
Manganese (II) chloride tetrahydrate 50 uM, aerobic
+0.5
-0.3
+0.0
-0.1
-1.7
survival
Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-1.3
+0.8
+0.2
-0.1
-1.1
survival
Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.7
+0.5
-0.1
+0.1
-1.3
survival
Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-1.4
+0.2
+0.2
+0.2
-0.7
survival
Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.7
-0.1
+0.1
+0.0
-2.1
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
-2.1
+0.8
+0.0
+0.1
+0.1
survival
Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-2.6
+0.8
+0.6
+0.5
-0.2
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-1.0
+0.5
+0.2
+0.2
-0.9
survival
Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-1.0
+0.7
+0.3
+0.0
-1.0
carbon source
Ying_all64 rep B; time point 3
+0.7
+0.1
+0.1
-0.0
-1.7
survival
Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-1.3
+0.9
+0.2
+0.2
-0.5
survival
Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
+0.9
-0.1
+0.1
+0.1
-1.4
survival
Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
+1.0
+0.2
+0.0
+0.2
-1.2
survival
Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
+1.4
-0.3
+0.2
+0.3
-1.0
stress
copper (II) chloride 2 uM, anaerobic
+2.2
+0.4
-0.1
+0.2
-1.0
survival
Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
+0.9
+0.7
+0.5
+0.4
+0.3
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
+0.8
+1.3
+0.6
+0.3
+0.0
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