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Cofit
Protein
Homologs
Fitness for 5 genes in
Pantoea sp. MT58
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
IAI47_10530 and IAI47_10535 are separated by 352 nucleotides
IAI47_10535 and IAI47_10540 are separated by 15 nucleotides
IAI47_10540 and IAI47_10545 are separated by 465 nucleotides
IAI47_10545 and IAI47_10550 are separated by 229 nucleotides
IAI47_10530: IAI47_10530 - hypothetical protein, at 2,231,899 to 2,232,102
_10530
IAI47_10535: IAI47_10535 - YgdI/YgdR family lipoprotein, at 2,232,455 to 2,232,688
_10535
IAI47_10540: IAI47_10540 - YgdI/YgdR family lipoprotein, at 2,232,704 to 2,232,934
_10540
IAI47_10545: IAI47_10545 - hypothetical protein, at 2,233,400 to 2,233,672
_10545
IAI47_10550: IAI47_10550 - two-component-system connector protein YcgZ, at 2,233,902 to 2,234,141
_10550
Group
Condition
IAI47
_10530
IAI47
_10535
IAI47
_10540
IAI47
_10545
IAI47
_10550
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-0.1
-0.4
-0.6
-2.4
-0.6
survival
Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-0.7
-0.1
-0.2
-1.7
-1.3
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.1
-0.4
+0.0
-2.7
-0.7
survival
Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.6
-0.7
-0.6
-0.8
-0.2
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50
-0.3
-0.1
-0.2
-1.9
-0.1
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.0
-0.2
-0.7
-1.3
-0.3
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-0.8
+0.2
-0.5
-0.2
-1.1
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.2
-0.4
-0.1
-1.1
-0.9
survival
Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-0.1
-0.3
+0.0
-1.9
+0.2
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-0.7
+0.1
-0.6
-1.0
-0.1
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-1.1
+0.3
-0.2
-1.1
+0.0
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50
-0.2
+0.1
+0.1
-1.3
-0.7
survival
Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-0.0
+0.3
-0.7
-1.5
+0.2
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50
-0.4
-0.4
+0.2
-1.4
+0.3
survival
Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.9
+0.3
+0.1
-1.6
+0.5
stress
copper (II) chloride 2 uM, anaerobic
-0.6
+0.2
+0.2
-0.3
-1.1
survival
Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.1
+0.2
-0.1
-1.6
+0.1
survival
Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-0.5
+0.9
-0.2
-1.1
-0.6
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=12hrs; Outgrowth=LBkan50
-0.4
+0.3
-0.5
-0.9
-0.1
survival
Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
+0.4
-0.4
-0.1
-1.7
+0.3
survival
Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
+0.0
-1.1
+0.1
-0.8
+0.3
survival
Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
+0.2
-0.1
+0.2
-1.8
+0.2
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50
-0.4
+0.6
-0.3
-1.2
+0.3
survival
Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.8
+0.6
-0.2
+0.1
-0.6
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.0
+0.3
-0.0
-1.5
+0.4
survival
Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-0.5
+0.2
-0.2
-0.9
+0.6
survival
Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.8
-0.3
+0.1
-0.8
+0.5
survival
Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.1
+0.4
+0.2
-1.0
+0.8
survival
Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-0.6
-0.2
+0.7
+0.6
+0.1
stress
copper (II) chloride 2 uM, anaerobic
-0.3
+1.0
+0.4
+0.8
-1.0
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IAI47_10530
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IAI47_10535
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IAI47_10540
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IAI47_10545
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IAI47_10550
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