Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_10385 and IAI47_10390 are separated by 99 nucleotidesIAI47_10390 and IAI47_10395 are separated by 365 nucleotidesIAI47_10395 and IAI47_10400 are separated by 203 nucleotidesIAI47_10400 and IAI47_10405 are separated by 588 nucleotides IAI47_10385: IAI47_10385 - L-arabinose ABC transporter ATP-binding protein AraG, at 2,200,247 to 2,201,767 _10385 IAI47_10390: IAI47_10390 - arabinose ABC transporter substrate-binding protein, at 2,201,867 to 2,202,850 _10390 IAI47_10395: IAI47_10395 - ribulokinase, at 2,203,216 to 2,204,919 _10395 IAI47_10400: IAI47_10400 - L-arabinose isomerase, at 2,205,123 to 2,206,622 _10400 IAI47_10405: IAI47_10405 - GNAT family N-acetyltransferase, at 2,207,211 to 2,207,678 _10405
Group Condition IAI47_10385 IAI47_10390 IAI47_10395 IAI47_10400 IAI47_10405
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 -0.1 -0.1 -0.1 -0.4
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -0.2 -0.1 -0.3 -0.4
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 -0.3 -0.2 -0.2 -0.0
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 +0.1 -0.1 -0.2 -0.3
stress copper (II) chloride 2 uM, anaerobic +0.0 -0.4 -0.2 -0.2 -0.2
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 -0.1 -0.3 -0.4 -0.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -0.2 -0.2 +0.1 -0.3
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 +0.3 -0.0 -0.6 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -0.3 -0.1 +0.1 +0.2
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 +0.3 +0.1 -0.1 -0.5
nitrogen source Ammonium chloride (N) +0.0 -0.3 -0.1 +0.4 -0.3
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 +0.5 -0.1 -0.6 +0.1
carbon source Ying_sugar7 rep C; time point 2 +0.4 -0.0 +0.2 -0.3 -0.4
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 +0.6 -0.4 -0.4 +0.0
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 +0.3 +0.1 -0.3 -0.4
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 +0.7 +0.0 -0.3 -0.3
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 +0.4 -0.1 -0.1 -0.5
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 -0.4 +0.0 -0.2 +0.2
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 +0.4 -0.1 -0.2 -0.0
survival Survival; Treatment=FW106 (pH3.9); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 +0.4 -0.2 -0.2 -0.2
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 +0.4 -0.4 -0.1 +0.0
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 +0.2 +0.0 -0.1 -0.3
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 +0.4 +0.3 -0.0 -0.3
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 -0.2 +0.1 +0.0 +0.6
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 +0.7 +0.0 -0.0 -0.2
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 +0.5 -0.0 +0.2 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 +0.4 +0.0 +0.1 +0.3
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 +0.7 +0.2 -0.0 +0.0
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 +0.4 +0.1 -0.1 -0.1
stress copper (II) chloride 2 uM, anaerobic +0.4 +0.4 +0.1 +0.4 +0.3
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