Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_10195 and IAI47_10200 are separated by 115 nucleotidesIAI47_10200 and IAI47_10205 overlap by 1 nucleotidesIAI47_10205 and IAI47_10210 overlap by 14 nucleotidesIAI47_10210 and IAI47_10215 are separated by 3 nucleotides IAI47_10195: IAI47_10195 - polyisoprenoid-binding protein, at 2,154,645 to 2,155,229 _10195 IAI47_10200: IAI47_10200 - pyrroloquinoline quinone biosynthesis protein PqqF, at 2,155,345 to 2,157,621 _10200 IAI47_10205: IAI47_10205 - pyrroloquinoline quinone biosynthesis protein PqqE, at 2,157,621 to 2,158,763 _10205 IAI47_10210: IAI47_10210 - pyrroloquinoline quinone biosynthesis peptide chaperone PqqD, at 2,158,750 to 2,159,028 _10210 IAI47_10215: IAI47_10215 - pyrroloquinoline-quinone synthase PqqC, at 2,159,032 to 2,159,787 _10215
Group Condition IAI47_10195 IAI47_10200 IAI47_10205 IAI47_10210 IAI47_10215
stress copper (II) chloride 2 uM, anaerobic -0.5 -0.2 -0.7 -0.5 +0.3
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 -0.3 -0.7 -0.2 -0.2
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 +0.1 +0.1 -0.8 -0.2
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -0.0 +0.0 -0.8 +0.5
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 -0.3 -0.3 +0.2 +0.2
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.4 -0.2 -0.4 -0.3
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 +0.4 +0.1 -0.1 -0.4
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 -0.1 +0.4 +0.1 -0.5
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 +0.1 -0.5 +0.5 -0.2
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.5 +0.2 +0.2 +0.3 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.1 +0.2 +0.5 -0.6
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.2 +0.4 -0.2 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.4 +0.3 +0.4 -0.0 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 +0.3 +0.5 -0.3 +0.3
stress copper (II) chloride 2 uM, anaerobic +0.2 +0.2 +0.0 +0.6 -0.4
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 +0.2 +0.1 +0.5 +0.3
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 +0.2 +0.5 -0.1 +0.2
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.4 -0.2 +0.4 -0.1
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.0 +0.3 +0.4 -0.3 +0.4
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 +0.2 +0.4 +0.4 -0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 +0.1 +0.3 +0.5 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.4 +0.3 +0.1 +0.8 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 +0.3 +0.3 +0.4 +0.2
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 +0.0 +0.0 +0.9 +0.2
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.3 +0.5 -0.1 +0.5 +0.5
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.0 -0.0 +0.0 +0.9 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 +0.1 +0.3 +0.6 +0.0
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.0 +0.4 +0.6 +0.3
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 +0.2 +0.7 +0.0 +0.4
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 +0.1 +0.4 +0.8 +0.5
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IAI47_10195
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IAI47_10200
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IAI47_10210
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IAI47_10215
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