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Protein
Homologs
Fitness for 5 genes in
Pantoea sp. MT58
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
IAI47_09730 and IAI47_09735 are separated by 77 nucleotides
IAI47_09735 and IAI47_09740 are separated by 704 nucleotides
IAI47_09740 and IAI47_09745 are separated by 95 nucleotides
IAI47_09745 and IAI47_09750 are separated by 130 nucleotides
IAI47_09730: IAI47_09730 - DUF1471 domain-containing protein, at 2,058,317 to 2,058,574
_09730
IAI47_09735: IAI47_09735 - sugar transporter, at 2,058,652 to 2,059,836
_09735
IAI47_09740: IAI47_09740 - MFS transporter, at 2,060,541 to 2,061,791
_09740
IAI47_09745: IAI47_09745 - LysR family transcriptional regulator, at 2,061,887 to 2,062,780
_09745
IAI47_09750: IAI47_09750 - ROK family transcriptional regulator, at 2,062,911 to 2,064,128
_09750
Group
Condition
IAI47
_09730
IAI47
_09735
IAI47
_09740
IAI47
_09745
IAI47
_09750
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.1
+0.0
-0.2
-0.1
-2.1
survival
Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
-1.0
-0.2
+0.1
-0.1
-1.1
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.2
+0.1
-0.3
-0.0
-1.9
carbon source
Ying_AminoAcid20 rep B; time point 3
-0.1
-0.0
-0.5
-0.2
-1.2
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.0
+0.1
-0.1
-0.3
-1.7
carbon source
Ying_Others16 rep A; time point 3
+0.0
-0.1
+0.1
-0.0
-2.0
carbon source
Ying_Others16 rep C; time point 3
-0.1
-0.1
-0.0
+0.1
-1.9
carbon source
Ying_Others16 rep C; time point 2
-0.2
+0.0
+0.0
-0.1
-1.7
carbon source
Ying_AminoAcid20 rep C; time point 3
+0.0
-0.0
-0.4
-0.0
-1.5
survival
Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.7
-0.0
-0.1
-0.2
-0.9
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.0
-0.1
-0.1
-0.1
-1.6
survival
Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.1
-0.2
-0.2
+0.1
-1.6
carbon source
Ying_Others16 rep B; time point 3
+0.3
-0.0
+0.1
-0.1
-2.0
survival
Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.3
+0.0
-0.0
+0.0
-1.9
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.3
-0.0
+0.0
-0.2
-1.6
survival
Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.2
+0.1
+0.0
-0.1
-1.3
survival
Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.2
-0.1
+0.0
-0.0
-1.5
carbon source
Ying_Others16 rep A; time point 2
-0.3
+0.1
+0.1
+0.1
-1.5
survival
Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.9
+0.1
+0.1
+0.3
-1.0
survival
Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.6
+0.2
+0.0
+0.5
-1.2
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.4
+0.0
+0.1
-0.1
-1.5
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
-1.0
+0.1
-0.3
+0.3
-0.3
survival
Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.2
-0.1
+0.2
-0.0
-1.3
survival
Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.2
+0.0
-0.0
+0.4
-1.3
survival
Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.6
+0.1
+0.2
-0.3
-0.4
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.2
+0.2
-0.1
+0.3
-1.2
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.2
+0.1
+0.2
+0.3
-1.1
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.3
+0.3
-0.0
+0.5
-0.8
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-0.8
+0.1
+0.0
+0.4
+0.6
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50
-0.6
+0.2
+0.2
+0.5
+0.4
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IAI47_09735
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IAI47_09740
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IAI47_09750
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