Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_09200 and IAI47_09205 are separated by 12 nucleotidesIAI47_09205 and IAI47_09210 are separated by 780 nucleotidesIAI47_09210 and IAI47_09215 are separated by 54 nucleotidesIAI47_09215 and IAI47_09220 overlap by 1 nucleotides IAI47_09200: IAI47_09200 - threonylcarbamoyl-AMP synthase, at 1,938,502 to 1,939,122 _09200 IAI47_09205: IAI47_09205 - serine protease, at 1,939,135 to 1,939,782 _09205 IAI47_09210: IAI47_09210 - 23S rRNA pseudouridine(2605) synthase RluB, at 1,940,563 to 1,941,453 _09210 IAI47_09215: IAI47_09215 - cob(I)yrinic acid a,c-diamide adenosyltransferase, at 1,941,508 to 1,942,098 _09215 IAI47_09220: IAI47_09220 - YciK family oxidoreductase, at 1,942,098 to 1,942,859 _09220
Group Condition IAI47_09200 IAI47_09205 IAI47_09210 IAI47_09215 IAI47_09220
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.4 -0.3 -0.8 -0.8 -0.2
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 -0.1 -1.8 -0.2 -0.0
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 +0.1 -1.7 -0.3 -0.2
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.5 +0.0 -1.4 -0.3 +0.1
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.1 -1.6 -0.2 -0.2
stress Defined media, anaerobic, with FW303 groundwater -0.0 +0.2 -1.6 -0.4 -0.0
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.2 -1.8 -0.4 +0.0
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 +0.4 -1.1 -0.2 -0.2
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 -0.3 -1.8 +0.2 +0.2
survival Survival; Treatment=FW106 (pH3.9); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.7 -0.1 -1.2 -0.4 -0.5
stress Manganese (II) chloride tetrahydrate 50 uM, aerobic +0.2 +0.3 -1.6 -0.1 -0.2
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.3 +0.4 -1.5 +0.3 -0.2
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.2 -1.4 -0.4 +0.1
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 +0.2 -1.4 -0.3 +0.2
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 +0.7 -1.4 -0.0 +0.1
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 +0.8 -0.9 -0.2 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.6 +1.4 -1.2 +0.1 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50 -0.3 +1.1 -0.9 -0.4 +0.2
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 +0.7 -1.0 +0.3 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50 -0.2 +0.9 -0.9 +0.0 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50 +0.2 +1.1 -0.9 -0.1 +0.0
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +1.4 -0.7 -0.1 -0.2
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 -0.1 +1.6 -0.6 -0.0
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 -0.5 +1.3 -0.1 +0.4
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 -0.4 +1.7 -0.5 -0.0
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 -0.3 +1.9 -0.1 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.4 -0.1 +1.2 -0.5 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 +0.4 +1.3 -0.3 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.5 +0.1 +1.9 -0.9 +0.5
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 +0.5 +1.6 -0.1 +0.4
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IAI47_09200
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IAI47_09205
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IAI47_09215
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IAI47_09220
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