Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_09070 and IAI47_09075 are separated by 92 nucleotidesIAI47_09075 and IAI47_09080 are separated by 14 nucleotidesIAI47_09080 and IAI47_09085 are separated by 11 nucleotidesIAI47_09085 and IAI47_09090 overlap by 4 nucleotides IAI47_09070: IAI47_09070 - oligopeptide ABC transporter substrate-binding protein OppA, at 1,916,628 to 1,918,268 _09070 IAI47_09075: IAI47_09075 - oligopeptide ABC transporter permease OppB, at 1,918,361 to 1,919,281 _09075 IAI47_09080: IAI47_09080 - oligopeptide ABC transporter permease OppC, at 1,919,296 to 1,920,204 _09080 IAI47_09085: IAI47_09085 - ABC transporter ATP-binding protein, at 1,920,216 to 1,921,232 _09085 IAI47_09090: IAI47_09090 - murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF, at 1,921,229 to 1,922,230 _09090
Group Condition IAI47_09070 IAI47_09075 IAI47_09080 IAI47_09085 IAI47_09090
nitrogen source TNT (N) -0.5 -0.6 -0.4 -0.5 -0.5
nitrogen source TNT (N) -0.5 -0.5 -0.4 -0.5 -0.5
nitrogen source TNT (N) -0.5 -0.3 -0.5 -0.3 -0.5
nitrogen source TNT (N) -0.5 -0.4 -0.4 -0.3 -0.4
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 -0.1 -0.5 -0.1 -0.5
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.3 -0.3 -0.4 +0.0 -0.4
stress copper (II) chloride 2 uM, anaerobic +0.1 -0.1 -0.3 -0.4 -0.5
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 -0.1 -0.3 -0.4 -0.0 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50 -0.3 +0.1 -0.3 -0.4 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 -0.0 -0.3 -0.3 -0.3
nitrogen source Ammonium chloride (N) -0.2 -0.2 -0.7 +0.0 -0.0
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 +0.1 -0.4 -0.4 -0.4
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 -0.4 -0.3 -0.2 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 -0.2 -0.2 -0.2 +0.3 -0.2
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 -0.3 +0.3 +0.2 -0.7
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 -0.0 -0.4 +0.4 -0.1
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 -0.2 +0.2 +0.0 -0.5
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 +0.3 -0.3 +0.1 -0.4
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.0 -0.1 +0.4 -0.6 -0.1
stress copper (II) chloride 2 uM, anaerobic -0.1 -0.6 +0.3 -0.1 +0.3
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 -0.3 -0.0 +0.1 +0.4
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 +0.2 +0.5 -0.4 -0.3
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.1 +0.3 -0.5 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 +0.0 +0.6 -0.5 +0.1
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 +0.3 +0.5 +0.0 -0.3
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 +0.2 +0.5 -0.2 +0.2
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 +0.0 +0.6 +0.1 +0.3
stress Aluminum potassium sulfate dodecahydrate 1 mM, aerobic +0.0 +0.3 +0.2 +0.3 +0.3
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 +0.1 +0.7 +0.3 +0.1
stress Aluminum potassium sulfate dodecahydrate 1 mM, aerobic -0.1 +0.2 +0.3 +0.4 +0.3
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