Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_08880 and IAI47_08885 are separated by 58 nucleotidesIAI47_08885 and IAI47_08890 are separated by 504 nucleotidesIAI47_08890 and IAI47_08895 are separated by 19 nucleotidesIAI47_08895 and IAI47_08900 overlap by 8 nucleotides IAI47_08880: IAI47_08880 - fatty acid metabolism transcriptional regulator FadR, at 1,874,513 to 1,875,232 _08880 IAI47_08885: IAI47_08885 - SpoVR family protein, at 1,875,291 to 1,876,826 _08885 IAI47_08890: IAI47_08890 - D-amino acid dehydrogenase, at 1,877,331 to 1,878,632 _08890 IAI47_08895: IAI47_08895 - catabolic alanine racemase DadX, at 1,878,652 to 1,879,722 _08895 IAI47_08900: IAI47_08900 - multidrug effflux MFS transporter, at 1,879,715 to 1,880,908 _08900
Group Condition IAI47_08880 IAI47_08885 IAI47_08890 IAI47_08895 IAI47_08900
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.9 -0.1 -0.4 N.D. -0.1
nitrogen source TNT (N) +0.1 -0.8 -0.4 N.D. +0.2
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.6 +0.1 -0.5 N.D. +0.2
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.1 -1.0 N.D. +0.1
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 +0.1 -0.4 N.D. +0.2
carbon source Ying_AminoAcid20 rep B; time point 2 -0.8 +0.6 -0.3 N.D. -0.0
carbon source Ying_AminoAcid20 rep C; time point 2 -0.7 +0.6 -0.4 N.D. -0.1
carbon source Ying_AminoAcid20 rep A; time point 2 -0.5 +0.6 -0.4 N.D. -0.0
carbon source Ying_Nucleobase14 rep A; time point 1 -0.7 +0.2 -0.0 N.D. +0.3
carbon source Ying_AminoAcid20 rep C; time point 3 -0.8 +0.9 -0.3 N.D. +0.0
carbon source Ying_AminoAcid20 rep B; time point 3 -0.7 +0.9 -0.3 N.D. -0.0
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.7 -0.3 -0.1 N.D. -0.3
carbon source Ying_AminoAcid20 rep A; time point 3 -0.6 +1.0 -0.4 N.D. -0.0
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.7 -0.2 -0.1 N.D. -0.2
carbon source Ying_Others16 rep C; time point 3 +0.4 +0.3 -0.5 N.D. -0.0
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.8 -0.2 +0.0 N.D. -0.4
stress copper (II) chloride 2 uM, anaerobic +0.7 -0.0 -0.4 N.D. +0.2
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.7 -0.2 +0.3 N.D. -0.5
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.8 +0.1 +0.1 N.D. -0.5
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.8 -0.2 +0.1 N.D. -0.3
carbon source Ying_all64 rep B; time point 3 +0.4 +0.4 -0.3 N.D. +0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +1.0 -0.2 +0.2 N.D. -0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +1.2 -0.2 +0.2 N.D. -0.3
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +1.9 -0.3 -0.2 N.D. -0.6
stress copper (II) chloride 2 uM, anaerobic +0.9 +0.3 -0.3 N.D. +0.0
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +2.2 -0.3 -0.1 N.D. -0.7
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.8 +0.1 +0.2 N.D. -0.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +2.2 -0.2 -0.1 N.D. -0.6
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +2.3 -0.2 -0.1 N.D. -0.6
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +2.1 -0.0 -0.1 N.D. -0.5
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IAI47_08885
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