Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_08770 and IAI47_08775 are separated by 509 nucleotidesIAI47_08775 and IAI47_08780 are separated by 89 nucleotidesIAI47_08780 and IAI47_08785 are separated by 225 nucleotidesIAI47_08785 and IAI47_08790 are separated by 184 nucleotides IAI47_08770: IAI47_08770 - PTS mannose transporter subunit IIAB, at 1,852,446 to 1,853,408 _08770 IAI47_08775: IAI47_08775 - TerC family protein, at 1,853,918 to 1,855,498 _08775 IAI47_08780: IAI47_08780 - EAL domain-containing protein, at 1,855,588 to 1,857,150 _08780 IAI47_08785: IAI47_08785 - L-serine ammonia-lyase, at 1,857,376 to 1,858,740 _08785 IAI47_08790: IAI47_08790 - CoA pyrophosphatase, at 1,858,925 to 1,859,488 _08790
Group Condition IAI47_08770 IAI47_08775 IAI47_08780 IAI47_08785 IAI47_08790
carbon source Ying_AminoAcid20 rep C; time point 3 +0.3 -0.5 +0.1 -1.8 +0.2
carbon source Ying_AminoAcid20 rep A; time point 3 +0.3 -0.5 +0.1 -1.8 +0.1
carbon source Ying_AminoAcid20 rep A; time point 2 +0.1 -0.6 +0.1 -1.3 -0.1
carbon source Ying_AminoAcid20 rep B; time point 3 +0.1 -0.4 +0.0 -1.6 +0.2
carbon source Ying_AminoAcid20 rep C; time point 2 +0.2 -0.4 +0.1 -1.4 -0.1
carbon source Ying_AminoAcid20 rep B; time point 2 +0.1 -0.5 +0.1 -1.1 -0.1
carbon source Ying_AminoAcid20 rep B; time point 1 +0.2 -0.4 +0.0 -0.8 -0.1
stress copper (II) chloride 5 uM, aerobic +0.0 -1.1 +0.0 -0.1 +0.1
stress copper (II) chloride 5 uM, aerobic +0.1 -0.9 +0.1 -0.2 +0.0
carbon source Ying_AminoAcid20 rep A; time point 1 +0.1 -0.4 +0.1 -0.7 +0.1
stress copper (II) chloride 5 uM, aerobic +0.2 -1.1 +0.2 -0.1 -0.0
carbon source Ying_sugar7 rep C; time point 2 +0.1 -0.8 +0.1 -0.1 +0.1
carbon source Ying_sugar7 rep B; time point 2 +0.3 -0.6 +0.2 -0.1 -0.1
carbon source Ying_sugar7 rep A; time point 3 +0.3 -0.7 +0.1 -0.1 +0.2
stress copper (II) chloride 2 uM, anaerobic +0.6 -0.4 -0.1 -0.1 -0.2
stress copper (II) chloride 2 uM, anaerobic +0.3 -0.4 +0.1 -0.4 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 -0.1 -0.1 -0.4 +0.4
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 +0.2 -0.4 -0.6 +0.4
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.2 -0.4 +0.1 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50 +0.2 +0.1 -0.4 +0.4 +0.2
stress copper (II) chloride 2 uM, anaerobic +0.8 +0.1 -0.2 -0.0 -0.3
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 -0.1 -0.2 -0.1 +0.7
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 +0.1 -0.5 +0.3 +0.6
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 -0.2 -0.2 +0.4 +0.5
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 +0.2 -0.2 +0.3 +0.3
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.6 -0.1 +0.1 -0.1 +0.3
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 +0.5 +0.2 -0.0 +0.5
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.1 +0.4 +0.2 +0.5
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 +0.1 -0.3 +0.5 +0.7
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.5 +0.4 -0.2 +0.7 +0.5
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IAI47_08770
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IAI47_08775
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IAI47_08790
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