Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_08445 and IAI47_08450 are separated by 8 nucleotidesIAI47_08450 and IAI47_08455 are separated by 0 nucleotidesIAI47_08455 and IAI47_08460 overlap by 4 nucleotidesIAI47_08460 and IAI47_08465 are separated by 77 nucleotides IAI47_08445: IAI47_08445 - Holliday junction branch migration protein RuvA, at 1,787,985 to 1,788,599 _08445 IAI47_08450: IAI47_08450 - Holliday junction branch migration DNA helicase RuvB, at 1,788,608 to 1,789,612 _08450 IAI47_08455: IAI47_08455 - zinc ABC transporter permease subunit ZnuB, at 1,789,613 to 1,790,398 _08455 IAI47_08460: IAI47_08460 - zinc ABC transporter ATP-binding protein ZnuC, at 1,790,395 to 1,791,150 _08460 IAI47_08465: IAI47_08465 - zinc ABC transporter substrate-binding protein ZnuA, at 1,791,228 to 1,792,175 _08465
Group Condition IAI47_08445 IAI47_08450 IAI47_08455 IAI47_08460 IAI47_08465
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -2.2 -2.4 -1.0 -0.6 -0.4
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -4.0 -2.0 -0.1 -0.1 -0.4
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -3.6 -3.3 -0.0 +0.4 +0.1
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -3.6 -2.5 +0.2 +0.0 -0.1
carbon source Ying_AminoAcid20 rep B; time point 3 -2.8 -3.2 -0.1 -0.1 +0.4
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -2.9 -2.9 -0.2 -0.1 +0.6
carbon source Ying_AminoAcid20 rep C; time point 3 -2.9 -3.2 -0.0 +0.1 +0.4
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -2.8 -2.9 -0.3 +0.0 +0.3
stress Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic -4.8 -1.6 +0.3 +0.2 +0.4
carbon source Ying_AminoAcid20 rep A; time point 3 -2.8 -3.0 +0.0 +0.1 +0.4
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -2.9 -2.8 +0.4 -0.1 +0.3
stress Manganese (II) chloride tetrahydrate 50 uM, anaerobic -4.5 -0.9 +0.4 -0.2 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=12hrs; Outgrowth=LBkan50 -3.1 -2.2 +0.5 +0.0 +1.0
carbon source Ying_Others16 rep B; time point 3 -2.9 -2.8 +0.7 +0.9 +1.3
stress dichromate 5 uM, aerobic -4.2 -1.0 +0.8 +0.7 +1.1
stress dichromate 5 uM, aerobic -3.0 -2.2 +0.7 +0.4 +1.4
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -2.5 -1.9 +0.5 +0.5 +0.7
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -3.0 -1.4 +0.6 +0.7 +0.7
carbon source Ying_Others16 rep A; time point 3 -2.8 -2.2 +1.0 +0.9 +1.4
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 -2.6 -1.2 +0.9 +0.5 +0.9
carbon source Ying_Others16 rep C; time point 3 -1.5 -2.3 +1.0 +1.0 +1.4
carbon source Ying_Others16 rep B; time point 2 -1.4 -2.0 +0.8 +0.9 +1.3
stress Aluminum potassium sulfate dodecahydrate 1 mM, aerobic -1.6 -1.3 +1.3 +1.1 +1.3
carbon source Ying_Nucleobase14 rep A; time point 2 -2.5 -1.4 +1.5 +1.6 +1.8
carbon source Ying_Nucleobase14 rep C; time point 2 -1.5 -1.2 +1.1 +1.3 +1.5
carbon source Ying_Nucleobase14 rep B; time point 3 -0.9 -2.2 +1.3 +1.4 +1.9
carbon source Ying_Nucleobase14 rep C; time point 3 -2.8 -1.9 +1.9 +1.9 +2.4
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -1.3 -0.8 +1.6 +0.7 +1.9
carbon source Ying_Nucleobase14 rep B; time point 2 -0.3 -1.4 +1.3 +1.4 +1.6
carbon source Ying_Nucleobase14 rep A; time point 3 -0.9 -1.9 +1.8 +1.7 +2.0
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