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Protein
Homologs
Fitness for 5 genes in
Pantoea sp. MT58
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
IAI47_08280 and IAI47_08285 overlap by 4 nucleotides
IAI47_08285 and IAI47_08290 are separated by 132 nucleotides
IAI47_08290 and IAI47_08295 overlap by 4 nucleotides
IAI47_08295 and IAI47_08300 are separated by 11 nucleotides
IAI47_08280: IAI47_08280 - flagellar transcriptional regulator FlhD, at 1,752,853 to 1,753,206
_08280
IAI47_08285: IAI47_08285 - flagellar transcriptional regulator FlhC, at 1,753,203 to 1,753,781
_08285
IAI47_08290: IAI47_08290 - flagellar motor stator protein MotA, at 1,753,914 to 1,754,801
_08290
IAI47_08295: IAI47_08295 - flagellar motor protein MotB, at 1,754,798 to 1,755,739
_08295
IAI47_08300: IAI47_08300 - chemotaxis protein CheA, at 1,755,751 to 1,757,733
_08300
Group
Condition
IAI47
_08280
IAI47
_08285
IAI47
_08290
IAI47
_08295
IAI47
_08300
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-1.5
-2.4
-0.5
-0.6
-0.7
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-2.0
-1.9
-0.5
-0.4
-0.7
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-1.9
-1.8
-0.9
-0.5
-0.2
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-2.1
-1.7
-0.7
-0.2
-0.4
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-1.6
-1.7
-0.3
-0.5
-0.9
survival
Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.7
-0.5
-1.4
-0.7
-0.9
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50
+0.9
+0.7
+0.9
+1.2
-0.5
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50
+1.1
+1.0
+0.8
+0.9
-0.4
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=12hrs; Outgrowth=LBkan50
+1.2
+0.8
+0.8
+0.9
-0.4
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
+1.3
+0.9
+0.8
+0.9
-0.3
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
+1.4
+1.0
+0.7
+0.9
-0.3
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50
+1.1
+0.9
+1.1
+1.2
-0.4
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
+1.3
+1.0
+0.9
+0.9
-0.1
survival
Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
+1.1
+0.9
+1.0
+1.2
-0.1
survival
Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
+1.4
+0.8
+1.0
+1.0
-0.1
survival
Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
+1.4
+0.9
+0.9
+1.1
-0.1
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
+1.2
+1.2
+1.2
+1.1
-0.3
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
+1.3
+1.2
+1.0
+1.1
-0.1
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
+1.3
+1.1
+1.0
+1.1
-0.0
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
+1.7
+1.2
+0.8
+0.9
+0.1
carbon source
Ying_all64 rep B; time point 3
+1.6
+1.7
+0.7
+0.8
+0.1
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=12hrs; Outgrowth=LBkan50
+1.7
+1.6
+1.5
+1.6
-1.2
carbon source
Ying_all64 rep C; time point 3
+1.7
+1.9
+0.9
+1.0
-0.1
carbon source
Ying_all64 rep A; time point 3
+1.6
+1.8
+1.0
+0.9
+0.0
carbon source
Ying_OrganicAcid7 rep B; time point 3
+2.1
+2.3
+0.8
+0.9
+0.1
carbon source
Ying_OrganicAcid7 rep C; time point 3
+2.2
+2.4
+0.7
+0.8
+0.2
carbon source
Ying_OrganicAcid7 rep A; time point 3
+2.4
+2.3
+0.9
+0.9
+0.2
carbon source
Ying_AminoAcid20 rep C; time point 3
+2.2
+2.3
+1.4
+1.4
+0.3
carbon source
Ying_AminoAcid20 rep B; time point 3
+2.1
+2.5
+1.4
+1.6
+0.3
carbon source
Ying_AminoAcid20 rep A; time point 3
+2.3
+2.5
+1.4
+1.5
+0.3
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IAI47_08290
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