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Protein
Homologs
Fitness for 5 genes in
Pantoea sp. MT58
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
IAI47_08265 and IAI47_08270 are separated by 453 nucleotides
IAI47_08270 and IAI47_08275 overlap by 4 nucleotides
IAI47_08275 and IAI47_08280 are separated by 1042 nucleotides
IAI47_08280 and IAI47_08285 overlap by 4 nucleotides
IAI47_08265: IAI47_08265 - phosphoethanolamine transferase EptA, at 1,747,507 to 1,749,135
_08265
IAI47_08270: IAI47_08270 - trehalose-phosphatase, at 1,749,589 to 1,750,377
_08270
IAI47_08275: IAI47_08275 - alpha,alpha-trehalose-phosphate synthase, at 1,750,374 to 1,751,810
_08275
IAI47_08280: IAI47_08280 - flagellar transcriptional regulator FlhD, at 1,752,853 to 1,753,206
_08280
IAI47_08285: IAI47_08285 - flagellar transcriptional regulator FlhC, at 1,753,203 to 1,753,781
_08285
Group
Condition
IAI47
_08265
IAI47
_08270
IAI47
_08275
IAI47
_08280
IAI47
_08285
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.0
-0.3
-0.0
-2.0
-1.9
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.0
-0.2
-0.0
-1.9
-1.8
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.0
+0.0
+0.1
-1.5
-2.4
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.2
-0.1
+0.1
-2.1
-1.7
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.1
-0.2
+0.1
-1.6
-1.7
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.1
-0.4
-0.1
-1.4
-1.5
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.0
-0.4
+0.1
-1.5
-1.4
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.3
-0.2
+0.1
-1.6
-1.2
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.0
-0.3
-0.3
-1.2
-1.3
survival
Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.0
-0.2
-0.1
-1.4
-1.2
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.1
+0.3
-0.2
-1.7
-1.3
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.1
-0.0
-0.3
+1.3
+1.2
nitrogen source
nitrogen source nitrite 1mM
-0.1
-0.4
+0.0
+1.4
+1.3
nitrogen source
nitrogen source nitrite 0.5mM
-0.1
-0.3
+0.1
+1.4
+1.2
nitrogen source
nitrogen source nitrite 1mM
-0.1
-0.3
-0.0
+1.4
+1.5
carbon source
Ying_sugar7 rep C; time point 3
-0.1
-0.1
-0.2
+1.4
+1.5
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.0
+0.7
-0.4
+1.2
+1.1
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.1
+0.4
-0.1
+1.3
+1.0
carbon source
Ying_sugar7 rep A; time point 3
-0.0
+0.0
-0.0
+1.6
+1.7
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-0.1
+0.2
+0.2
+1.7
+1.2
carbon source
Ying_all64 rep B; time point 3
+0.0
+0.1
-0.1
+1.6
+1.7
carbon source
Ying_all64 rep A; time point 3
-0.1
+0.0
-0.1
+1.6
+1.8
carbon source
Ying_all64 rep C; time point 3
-0.1
+0.0
-0.0
+1.7
+1.9
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=12hrs; Outgrowth=LBkan50
-0.2
+0.4
-0.0
+1.7
+1.6
carbon source
Ying_OrganicAcid7 rep C; time point 3
-0.1
-0.2
-0.1
+2.2
+2.4
carbon source
Ying_AminoAcid20 rep C; time point 3
-0.0
-0.0
-0.2
+2.2
+2.3
carbon source
Ying_AminoAcid20 rep B; time point 3
-0.0
-0.0
-0.3
+2.1
+2.5
carbon source
Ying_OrganicAcid7 rep B; time point 3
-0.1
+0.1
+0.1
+2.1
+2.3
carbon source
Ying_OrganicAcid7 rep A; time point 3
+0.0
+0.1
+0.0
+2.4
+2.3
carbon source
Ying_AminoAcid20 rep A; time point 3
+0.0
+0.2
-0.2
+2.3
+2.5
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