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Protein
Homologs
Fitness for 5 genes in
Pantoea sp. MT58
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
IAI47_08250 and IAI47_08255 are separated by 307 nucleotides
IAI47_08255 and IAI47_08260 overlap by 4 nucleotides
IAI47_08260 and IAI47_08265 overlap by 1 nucleotides
IAI47_08265 and IAI47_08270 are separated by 453 nucleotides
IAI47_08250: IAI47_08250 - flavin reductase family protein, at 1,744,898 to 1,745,464
_08250
IAI47_08255: IAI47_08255 - two-component system sensor histidine kinase PmrB, at 1,745,772 to 1,746,830
_08255
IAI47_08260: IAI47_08260 - two-component system response regulator PmrA, at 1,746,827 to 1,747,507
_08260
IAI47_08265: IAI47_08265 - phosphoethanolamine transferase EptA, at 1,747,507 to 1,749,135
_08265
IAI47_08270: IAI47_08270 - trehalose-phosphatase, at 1,749,589 to 1,750,377
_08270
Group
Condition
IAI47
_08250
IAI47
_08255
IAI47
_08260
IAI47
_08265
IAI47
_08270
survival
Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.3
-0.8
-0.4
-0.3
-0.3
survival
Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-0.8
-0.1
-0.1
+0.1
-0.3
survival
Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.0
-0.2
-0.4
+0.1
-0.5
survival
Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-0.4
-0.2
-0.2
+0.2
-0.3
carbon source
Ying_sugar7 rep C; time point 2
-0.6
-0.2
+0.1
+0.1
-0.3
survival
Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.2
+0.0
-0.1
-0.1
-0.8
stress
copper (II) chloride 2 uM, anaerobic
-1.1
+0.6
+0.2
+0.1
-0.5
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
+0.1
-0.4
-0.5
-0.1
+0.2
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.8
-0.2
-0.1
-0.1
+0.5
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-0.3
-0.1
-0.5
-0.1
+0.4
survival
Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.1
+0.2
+0.1
+0.1
-1.1
survival
Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.3
+0.2
-0.1
+0.2
-0.6
no stress control
Defined media control, aerobic
-0.2
-0.4
-0.2
+0.0
+0.4
survival
Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
+0.1
-0.3
-0.5
-0.0
+0.5
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50
+0.3
-0.3
-0.4
-0.0
+0.2
survival
Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
+0.4
+0.1
-0.2
-0.1
-0.4
survival
Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
+0.2
+0.3
-0.1
+0.1
-0.6
survival
Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.2
+0.2
+0.3
+0.0
-0.8
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
+0.2
-0.3
-0.2
-0.1
+0.5
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50
-0.1
-0.3
-0.3
-0.0
+0.8
survival
Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.5
-0.2
+0.1
-0.0
-0.2
survival
Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.5
-0.0
+0.1
+0.1
-0.4
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
+0.0
-0.2
-0.3
-0.0
+0.8
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.2
+0.1
-0.4
+0.1
+0.4
survival
Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.6
+0.0
-0.1
+0.2
-0.3
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.3
-0.2
-0.1
+0.0
+0.7
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=6hrs; Outgrowth=LBkan50
+0.4
-0.1
-0.1
+0.1
+0.6
survival
Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.1
+0.4
-0.1
-0.0
+0.6
survival
Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
+0.5
+0.2
+0.0
-0.0
+0.5
stress
copper (II) chloride 2 uM, anaerobic
+0.7
+0.4
+0.2
-0.3
+0.3
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IAI47_08250
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IAI47_08255
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IAI47_08260
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IAI47_08270
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