Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_08205 and IAI47_08210 are separated by 190 nucleotidesIAI47_08210 and IAI47_08215 are separated by 55 nucleotidesIAI47_08215 and IAI47_08220 are separated by 2 nucleotidesIAI47_08220 and IAI47_08225 are separated by 572 nucleotides IAI47_08205: IAI47_08205 - sodium/proline symporter PutP, at 1,734,009 to 1,735,493 _08205 IAI47_08210: IAI47_08210 - FTR1 family protein, at 1,735,684 to 1,736,508 _08210 IAI47_08215: IAI47_08215 - iron uptake system protein EfeO, at 1,736,564 to 1,737,679 _08215 IAI47_08220: IAI47_08220 - deferrochelatase/peroxidase EfeB, at 1,737,682 to 1,738,959 _08220 IAI47_08225: IAI47_08225 - phosphate starvation-inducible protein PhoH, at 1,739,532 to 1,740,320 _08225
Group Condition IAI47_08205 IAI47_08210 IAI47_08215 IAI47_08220 IAI47_08225
carbon source Ying_AminoAcid20 rep C; time point 3 -1.4 -0.1 -0.1 -0.2 -0.3
carbon source Ying_AminoAcid20 rep B; time point 3 -1.3 +0.0 -0.1 -0.2 -0.2
carbon source Ying_AminoAcid20 rep A; time point 3 -1.2 -0.1 -0.1 -0.0 -0.1
carbon source Ying_all64 rep C; time point 3 -0.5 -0.2 -0.2 -0.3 -0.2
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 -1.0 -0.0 -0.1 +0.1
carbon source Ying_AminoAcid20 rep C; time point 2 -1.1 -0.1 +0.1 -0.1 -0.3
carbon source Ying_AminoAcid20 rep A; time point 2 -1.0 -0.0 +0.0 -0.0 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 -0.7 -0.2 -0.1 +0.1
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.6 -0.7 +0.1 -0.2 +0.2
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 -0.6 -0.2 +0.2 -0.5
carbon source Ying_AminoAcid20 rep B; time point 2 -0.9 -0.1 +0.1 -0.0 -0.1
nitrogen source nitrogen source nitrate 20mM +0.0 -0.2 +0.1 -0.1 -0.8
nitrogen source nitrogen source nitrite 1mM +0.1 +0.1 -0.0 -0.0 -1.1
carbon source Ying_AminoAcid20 rep C; time point 1 -0.6 +0.2 +0.1 -0.2 -0.2
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.3 -0.8 +0.2 +0.4 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 -0.2 +0.3 -0.1 +0.1 -0.6
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -0.1 -0.4 -0.2 +0.4
nitrogen source nitrogen source nitrite 1mM +0.2 +0.1 +0.1 +0.1 -0.9
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 +0.3 +0.4 -0.4 -0.4
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.2 +0.3 +0.2 -0.6
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 -0.1 +0.3 +0.3 -0.5
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.3 +0.3 +0.3 -0.6
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 +0.2 -0.1 +0.3 -0.6
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.0 +0.2 +0.3 -0.7
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.0 +0.3 +0.2 -0.8
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.3 +0.1 +0.1 -0.6
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.0 +0.5 +0.2 -0.6
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.1 +0.4 +0.3 -0.4
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 -0.3 +0.3 +0.3 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50 +0.4 +0.5 +0.2 +0.2 -0.0
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IAI47_08205
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IAI47_08210
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IAI47_08220
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IAI47_08225
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