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Protein
Homologs
Fitness for 5 genes in
Pantoea sp. MT58
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500 nt
IAI47_08125 and IAI47_08130 are separated by 101 nucleotides
IAI47_08130 and IAI47_08135 overlap by 1 nucleotides
IAI47_08135 and IAI47_08140 are separated by 11 nucleotides
IAI47_08140 and IAI47_08145 are separated by 337 nucleotides
IAI47_08125: IAI47_08125 - alpha-amylase, at 1,713,265 to 1,714,746
_08125
IAI47_08130: IAI47_08130 - flagella biosynthesis regulatory protein FliT, at 1,714,848 to 1,715,213
_08130
IAI47_08135: IAI47_08135 - flagellar export chaperone FliS, at 1,715,213 to 1,715,620
_08135
IAI47_08140: IAI47_08140 - flagellar filament capping protein FliD, at 1,715,632 to 1,717,047
_08140
IAI47_08145: IAI47_08145 - flagellin FliC, at 1,717,385 to 1,719,106
_08145
Group
Condition
IAI47
_08125
IAI47
_08130
IAI47
_08135
IAI47
_08140
IAI47
_08145
stress
Aluminum potassium sulfate dodecahydrate 1 mM, aerobic
+0.0
-0.3
-2.2
-1.4
-0.8
survival
Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.0
-0.4
-1.4
-1.3
-1.1
survival
Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.0
-0.7
-1.4
-0.7
-1.0
survival
Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.1
-0.4
-1.3
-0.9
-1.1
survival
Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.0
-0.4
-1.1
-1.0
-1.1
stress
Aluminum potassium sulfate dodecahydrate 1 mM, aerobic
-0.2
-0.5
-1.6
-0.8
-0.5
survival
Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.2
-0.2
-1.2
-1.1
-1.2
survival
Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.2
-0.5
-1.3
-1.0
-0.7
survival
Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.1
-0.6
-0.9
-0.7
-1.0
survival
Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.1
-0.3
-1.2
-0.8
-0.9
survival
Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.1
-0.6
-0.8
-0.9
-0.8
survival
Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.0
-0.9
-1.0
-0.7
-0.5
survival
Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.1
+0.1
-1.4
-0.9
-0.6
survival
Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.2
-0.4
-1.0
-0.8
-0.6
stress
dichromate 5 uM, aerobic
-0.0
-0.7
-0.9
-0.7
-0.5
survival
Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.2
-0.3
-0.8
-0.8
-0.6
survival
Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.3
-0.8
-0.8
-0.8
-0.5
survival
Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.1
-0.6
-0.5
-0.9
-0.6
survival
Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50
+0.2
-0.2
-0.9
-0.7
-0.9
survival
Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-0.7
+0.3
-0.8
+0.0
+1.0
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.4
+0.3
+0.5
+0.7
+0.8
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50
-0.0
-0.2
+1.0
+0.8
+0.7
carbon source
Ying_all64 rep A; time point 3
-0.0
-0.0
+1.1
+0.5
+1.1
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.3
+0.4
+0.7
+0.8
+1.0
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.2
+0.1
+0.8
+0.8
+1.1
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=12hrs; Outgrowth=LBkan50
-0.1
+0.0
+0.9
+1.0
+1.4
stress
copper (II) chloride 2 uM, anaerobic
+0.0
-0.1
+1.7
+0.8
+1.0
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=36hrs; Outgrowth=LBkan50
+0.0
+0.2
+1.1
+1.2
+1.1
stress
copper (II) chloride 2 uM, anaerobic
+0.3
-0.1
+1.9
+0.9
+0.6
stress
copper (II) chloride 2 uM, anaerobic
+0.3
+0.9
+2.4
+0.9
+0.4
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