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Protein
Homologs
Fitness for 5 genes in
Pantoea sp. MT58
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
IAI47_08040 and IAI47_08045 are separated by 442 nucleotides
IAI47_08045 and IAI47_08050 are separated by 19 nucleotides
IAI47_08050 and IAI47_08055 are separated by 1738 nucleotides
IAI47_08055 and IAI47_08060 are separated by 798 nucleotides
IAI47_08040: IAI47_08040 - hypothetical protein, at 1,698,053 to 1,698,289
_08040
IAI47_08045: IAI47_08045 - NUDIX domain-containing protein, at 1,698,732 to 1,699,190
_08045
IAI47_08050: IAI47_08050 - hypothetical protein, at 1,699,210 to 1,699,827
_08050
IAI47_08055: IAI47_08055 - lysis protein, at 1,701,566 to 1,702,030
_08055
IAI47_08060: IAI47_08060 - IS3 family transposase, at 1,702,829 to 1,703,929
_08060
Group
Condition
IAI47
_08040
IAI47
_08045
IAI47
_08050
IAI47
_08055
IAI47
_08060
survival
Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-1.3
-1.6
-1.1
-0.5
-0.5
survival
Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-1.1
-2.8
-0.3
-0.3
+0.2
survival
Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-0.1
-2.8
-0.1
-0.3
-0.1
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50
-0.8
-0.9
-0.6
-0.5
-0.7
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-0.5
+0.4
-1.3
-1.2
-0.8
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-0.2
-0.5
-0.9
-0.6
-1.0
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-0.2
-1.0
-0.7
-0.5
-0.6
survival
Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50
-1.5
-1.2
-0.1
-0.1
+0.0
survival
Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.3
-1.1
-0.7
-0.3
-0.3
nitrogen source
Ammonium chloride (N)
-1.8
-0.2
-0.1
-0.4
-0.1
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=6hrs; Outgrowth=LBkan50
-0.0
-1.3
-0.5
-0.6
-0.3
survival
Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.8
-1.0
-0.1
-0.6
-0.1
survival
Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-0.7
-0.0
-0.6
-0.7
-0.6
survival
Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.6
-0.1
-0.6
-0.6
-0.6
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50
-0.2
-0.1
-0.7
-0.8
-0.7
survival
Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
+0.6
-2.3
-0.1
-0.5
-0.2
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50
-0.8
+0.1
-0.5
-0.6
-0.6
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50
+0.2
-0.9
-0.5
-0.5
-0.5
survival
Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
+0.5
-0.8
-0.9
-0.8
-0.3
survival
Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
-2.1
-0.2
+0.3
-0.1
-0.1
survival
Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
+0.9
-0.4
-1.1
-0.6
-0.8
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=6hrs; Outgrowth=LBkan50
-0.3
+0.4
-0.7
-0.8
-0.5
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50
+0.4
-0.2
-0.4
-0.7
-0.8
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.5
-1.2
-0.3
+0.2
+0.3
survival
Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.2
-1.5
+0.5
-0.1
+0.2
survival
Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-1.9
+1.3
-0.0
-0.4
-0.2
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50
+0.2
+0.8
-0.6
-0.9
-0.7
survival
Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
-0.3
-1.5
+0.4
+0.4
-0.1
survival
Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50
+0.0
+0.8
-0.9
-0.6
-0.4
survival
Survival; Treatment=FW106 (pH3.9); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
-1.0
+1.8
-1.3
-0.0
+0.4
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IAI47_08050
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