Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_07890 and IAI47_07895 are separated by 171 nucleotidesIAI47_07895 and IAI47_07900 are separated by 611 nucleotidesIAI47_07900 and IAI47_07905 are separated by 71 nucleotidesIAI47_07905 and IAI47_07910 are separated by 43 nucleotides IAI47_07890: IAI47_07890 - DgsA anti-repressor MtfA, at 1,672,793 to 1,673,566 _07890 IAI47_07895: IAI47_07895 - hypothetical protein, at 1,673,738 to 1,674,415 _07895 IAI47_07900: IAI47_07900 - phosphohydrolase, at 1,675,027 to 1,675,731 _07900 IAI47_07905: IAI47_07905 - Arc family DNA-binding protein, at 1,675,803 to 1,676,084 _07905 IAI47_07910: IAI47_07910 - DNA (cytosine-5-)-methyltransferase, at 1,676,128 to 1,677,504 _07910
Group Condition IAI47_07890 IAI47_07895 IAI47_07900 IAI47_07905 IAI47_07910
stress Manganese (II) chloride tetrahydrate 50 uM, anaerobic -0.1 -0.0 -0.1 -4.2 +0.2
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.5 -0.3 +0.3 -1.8 -0.4
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.9 -0.9 +0.2 -1.9 -0.0
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.1 -0.1 -3.5 +0.0
carbon source Ying_sugar7 rep C; time point 3 -0.4 -2.5 +0.2 -0.0 -0.6
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 -1.2 +0.1 -1.8 -0.3
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.8 -0.2 -0.1 -3.4 +0.1
survival Survival; Treatment=FW106 (pH3.9); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.9 -0.4 +0.1 -3.3 -0.0
stress Cadmium acetate 8 uM, aerobic +0.3 +0.1 -0.2 -2.8 +0.2
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.6 -0.2 -0.0 -2.9 +0.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 +0.0 -0.5 -2.0 +0.7
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 +0.7 +0.3 +0.1 -3.2 +0.1
carbon source Ying_sugar7 rep A; time point 3 +0.2 -2.0 +0.2 +0.4 -0.7
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 +0.4 +0.1 -2.7 +0.4
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.9 -0.3 +0.2 -2.3 +0.1
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -1.5 -0.8 +0.3 +1.0 -0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +1.0 +0.3 -0.3 -3.0 +1.1
carbon source Ying_sugar7 rep B; time point 3 +0.0 -2.5 +0.3 +2.0 -0.6
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 +0.4 -0.2 -2.0 +0.5
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.7 +0.5 -0.0 -2.5 +0.5
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 -1.2 +0.0 +1.5 -0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50 +0.5 +0.7 -0.2 -1.6 +0.9
carbon source Ying_all64 rep A; time point 3 +0.6 -1.3 +0.0 +1.3 -0.4
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.5 -0.8 +0.1 +2.2 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.8 +0.4 -0.0 -1.3 +0.9
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 -0.5 +0.3 +2.3 -0.4
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 -0.7 +0.2 +2.1 +0.2
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 +0.3 -0.3 +1.9 +0.7
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +1.4 +0.0 +0.1 +1.6 +0.3
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 +0.7 +0.2 +2.0 +0.6
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