Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_07885 and IAI47_07890 are separated by 103 nucleotidesIAI47_07890 and IAI47_07895 are separated by 171 nucleotidesIAI47_07895 and IAI47_07900 are separated by 611 nucleotidesIAI47_07900 and IAI47_07905 are separated by 71 nucleotides IAI47_07885: IAI47_07885 - tRNA-Asn, at 1,672,614 to 1,672,689 _07885 IAI47_07890: IAI47_07890 - DgsA anti-repressor MtfA, at 1,672,793 to 1,673,566 _07890 IAI47_07895: IAI47_07895 - hypothetical protein, at 1,673,738 to 1,674,415 _07895 IAI47_07900: IAI47_07900 - phosphohydrolase, at 1,675,027 to 1,675,731 _07900 IAI47_07905: IAI47_07905 - Arc family DNA-binding protein, at 1,675,803 to 1,676,084 _07905
Group Condition IAI47_07885 IAI47_07890 IAI47_07895 IAI47_07900 IAI47_07905
stress Manganese (II) chloride tetrahydrate 50 uM, anaerobic -0.5 -0.1 -0.0 -0.1 -4.2
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -1.7 -0.8 -0.4 +0.1 -1.5
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -1.3 -0.1 -1.2 +0.1 -1.8
no stress control Defined media control, aerobic -3.7 -0.5 -0.0 +0.1 +0.3
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -3.8 -0.7 -0.1 -0.1 +0.9
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -3.7 -0.2 +0.6 -0.1 -0.0
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -3.7 -0.5 +0.1 -0.2 +0.9
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -3.7 -0.1 +0.6 -0.1 +0.3
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -3.6 -0.4 -0.1 +0.1 +1.1
survival Survival; Treatment=FW106 (pH3.9); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 +0.9 -0.4 +0.1 -3.3
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -1.6 +1.1 -0.4 -0.2 -1.3
stress copper (II) chloride 2 uM, anaerobic -2.4 +0.3 -0.4 +0.8 -0.5
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +1.1 -1.5 -0.3 +0.3 -1.8
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.8 +0.8 -0.2 -0.1 -3.4
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -3.7 +0.3 -0.7 +0.2 +2.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.8 +0.6 -0.2 -0.0 -2.9
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -3.6 +0.4 +0.3 -0.3 +1.9
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 +0.9 +0.7 +0.3 +0.1 -3.2
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +1.7 -0.9 -0.9 +0.2 -0.8
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +2.6 +1.0 +0.3 -0.3 -3.0
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +1.9 +0.7 +0.5 -0.0 -2.5
carbon source Ying_sugar7 rep B; time point 3 +1.4 +0.0 -2.5 +0.3 +2.0
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +3.1 +0.0 -0.1 -0.1 -1.7
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +3.5 +0.2 +0.4 +0.1 -2.7
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +1.7 -0.4 -1.2 +0.0 +1.5
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +1.7 -0.6 -0.7 -0.1 +1.5
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +3.0 +0.0 +0.7 -0.0 -0.8
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +2.7 +1.0 +0.4 -0.2 -0.5
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +2.0 +0.5 +0.8 -0.1 +1.2
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +5.3 +0.2 +0.4 -0.2 -0.7
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IAI47_07885
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IAI47_07890
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IAI47_07900
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IAI47_07905
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