Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_07855 and IAI47_07860 are separated by 425 nucleotidesIAI47_07860 and IAI47_07865 are separated by 1461 nucleotidesIAI47_07865 and IAI47_07870 are separated by 465 nucleotidesIAI47_07870 and IAI47_07875 are separated by 193 nucleotides IAI47_07855: IAI47_07855 - response regulator transcription factor, at 1,663,355 to 1,664,098 _07855 IAI47_07860: IAI47_07860 - NCS2 family permease, at 1,664,524 to 1,665,819 _07860 IAI47_07865: IAI47_07865 - AMP nucleosidase, at 1,667,281 to 1,668,735 _07865 IAI47_07870: IAI47_07870 - EmmdR/YeeO family multidrug/toxin efflux MATE transporter, at 1,669,201 to 1,670,610 _07870 IAI47_07875: IAI47_07875 - beta-propeller fold lactonase family protein, at 1,670,804 to 1,671,916 _07875
Group Condition IAI47_07855 IAI47_07860 IAI47_07865 IAI47_07870 IAI47_07875
survival Survival; Treatment=FW106 (pH3.9); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 -0.2 -0.1 -0.1 -0.4
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4 and 2 mg/mL CCCP; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.6 +0.0 -0.1 +0.0 -0.1
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.3 +0.1 -0.3 -0.5
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.5 -0.1 +0.0 +0.1 +0.1
stress copper (II) chloride 2 uM, anaerobic -0.5 -0.1 +0.1 +0.1 +0.1
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 +0.1 -0.2 -0.4 +0.1
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 +0.1 -0.1 +0.1 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50 -0.3 -0.2 +0.3 -0.1 +0.1
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 +0.1 +0.3 -0.1 +0.0
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 -0.0 +0.2 +0.1 +0.1
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.5 -0.1 +0.1 -0.1 -0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 +0.3 +0.1 +0.1 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50 -0.3 +0.2 +0.1 +0.1 +0.0
carbon source Ying_all64 rep A; time point 3 +0.3 +0.1 -0.2 +0.1 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.3 +0.2 +0.2 +0.1 +0.0
carbon source Ying_sugar7 rep C; time point 2 +0.2 +0.1 +0.0 +0.3 -0.2
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 +0.2 +0.1 -0.0 -0.2
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 +0.3 +0.1 -0.1 -0.1
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 +0.1 +0.3 +0.1 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 +0.4 +0.1 +0.2 +0.0
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 -0.2 +0.1 +0.3 +0.1
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.0 +0.1 +0.4 +0.0 -0.2
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 -0.1 +0.0 +0.1 +0.2
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.0 -0.1 +0.4 +0.2 +0.1
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.1 +0.1 +0.2 +0.2 +0.1
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 +0.1 +0.3 -0.1 +0.2
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 +0.2 +0.2 -0.2 +0.2
stress copper (II) chloride 2 uM, anaerobic -0.0 -0.1 +0.2 +0.3 +0.5
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.3 +0.2 +0.1 +0.2
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 +0.4 +0.4 +0.1 +0.3
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IAI47_07855
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IAI47_07860
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IAI47_07870
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IAI47_07875
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