Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_07830 and IAI47_07835 are separated by 90 nucleotidesIAI47_07835 and IAI47_07840 are separated by 43 nucleotidesIAI47_07840 and IAI47_07845 are separated by 111 nucleotidesIAI47_07845 and IAI47_07850 are separated by 165 nucleotides IAI47_07830: IAI47_07830 - ribose ABC transporter permease, at 1,658,701 to 1,659,681 _07830 IAI47_07835: IAI47_07835 - ABC transporter substrate-binding protein, at 1,659,772 to 1,660,710 _07835 IAI47_07840: IAI47_07840 - D-lyxose/D-mannose family sugar isomerase, at 1,660,754 to 1,661,437 _07840 IAI47_07845: IAI47_07845 - AraC family transcriptional regulator, at 1,661,549 to 1,662,421 _07845 IAI47_07850: IAI47_07850 - SDR family oxidoreductase, at 1,662,587 to 1,663,318 _07850
Group Condition IAI47_07830 IAI47_07835 IAI47_07840 IAI47_07845 IAI47_07850
stress copper (II) chloride 2 uM, anaerobic -0.4 +0.5 +0.1 -0.2 -1.2
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 -0.0 -0.2 -0.3 -0.2
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.4 +0.1 -0.2 +0.1 -0.4
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 -0.4 -0.1 -0.3 +0.5
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50 -0.2 -0.2 -0.1 -0.5 +0.4
carbon source Ying_sugar7 rep C; time point 2 -0.3 +0.0 +0.1 +0.2 -0.8
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 +0.5 -0.2 -0.3 -0.3 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50 +0.2 -0.2 +0.1 -0.4 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 -0.5 -0.1 -0.3 +0.1
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.7 -0.4 -0.0 +0.7
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 +0.2 -0.1 +0.2 -0.5
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.5 -0.2 -0.2 -0.2 -0.2
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 -0.3 +0.2 +0.0 +0.2
stress Manganese (II) chloride tetrahydrate 50 uM, aerobic -0.2 +0.2 +0.2 -0.3 -0.2
survival Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 +0.1 -0.1 -0.2 -0.3
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 -0.3 -0.2 -0.3 +0.4
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.3 +0.2 -0.2 -0.4 +0.0
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.5 -0.1 -0.1 +0.2 -0.2
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.4 -0.2 +0.1 +0.2 -0.2
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.3 +0.1 -0.1 +0.5
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.6 +0.0 +0.1 -0.2 -0.1
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.8 -0.2 -0.0 -0.1 +0.1
survival Survival; Treatment=UGA synthetic gw pH3.9 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 +0.4 +0.2 -0.1 +0.2
survival Survival; Treatment=FW106 (pH3.9); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.6 +0.5 -0.1 +0.1 -0.2
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.5 -0.1 +0.2 +0.4 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.5 +0.1 +0.3 -0.1 +0.2
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 +0.6 +0.1 -0.2 +0.1
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.2 +0.3 +0.1 +0.3
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.3 +0.4 +0.0 +0.2
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.0 +0.2 +0.5 -0.1 +0.6
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IAI47_07830
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IAI47_07835
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IAI47_07845
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IAI47_07850
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