Fitness for 5 genes in Pantoea sp. MT58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 309 experiments or choose conditions or try the comparative fitness browser

500 ntIAI47_07825 and IAI47_07830 are separated by 10 nucleotidesIAI47_07830 and IAI47_07835 are separated by 90 nucleotidesIAI47_07835 and IAI47_07840 are separated by 43 nucleotidesIAI47_07840 and IAI47_07845 are separated by 111 nucleotides IAI47_07825: IAI47_07825 - sugar ABC transporter ATP-binding protein, at 1,657,176 to 1,658,690 _07825 IAI47_07830: IAI47_07830 - ribose ABC transporter permease, at 1,658,701 to 1,659,681 _07830 IAI47_07835: IAI47_07835 - ABC transporter substrate-binding protein, at 1,659,772 to 1,660,710 _07835 IAI47_07840: IAI47_07840 - D-lyxose/D-mannose family sugar isomerase, at 1,660,754 to 1,661,437 _07840 IAI47_07845: IAI47_07845 - AraC family transcriptional regulator, at 1,661,549 to 1,662,421 _07845
Group Condition IAI47_07825 IAI47_07830 IAI47_07835 IAI47_07840 IAI47_07845
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 -0.4 -0.4 -0.1 -0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50 +0.1 -0.2 -0.2 -0.1 -0.5
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.2 -0.7 -0.4 -0.0
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 -0.1 -0.5 -0.3 -0.1
survival Survival; Treatment=FW104 (pH 5); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 -0.1 -0.3 -0.1 -0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.3 -0.5 -0.1 -0.3
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 +0.2 -0.3 -0.2 -0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=2hrs; Outgrowth=LBkan50 +0.4 -0.2 -0.4 -0.2 -0.0
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 -0.5 -0.3 +0.2 +0.0
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=4hrs; Outgrowth=LBkan50 +0.1 +0.5 -0.2 -0.3 -0.3
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=6hrs; Outgrowth=LBkan50 +0.2 +0.2 -0.2 -0.2 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=1hrs; Outgrowth=LBkan50 +0.2 +0.2 -0.2 +0.1 -0.4
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.5 -0.2 -0.2 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 +0.3 +0.2 -0.2 -0.4
stress copper (II) chloride 2 uM, anaerobic +0.1 -0.4 +0.5 +0.1 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.4 +0.2 +0.0 -0.1 -0.3
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.0 +0.8 -0.2 -0.0 -0.1
nitrogen source Ammonium chloride (N) -0.3 +0.3 +0.1 +0.0 +0.3
survival Survival; Treatment=FW106 (pH3.9); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.6 +0.6 +0.5 -0.1 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 +0.3 +0.3 -0.1 -0.1
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 +0.1 -0.2 +0.5 +0.0
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 +0.4 -0.2 +0.1 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.6 +0.0 +0.1 -0.2
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 +0.3 +0.2 -0.2 +0.2
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 +0.6 +0.1 +0.0 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.5 +0.1 +0.3 -0.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.1 +0.5 +0.1 -0.2
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.2 +0.3 +0.4 +0.0
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.4 +0.6 +0.1 -0.2
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 +0.5 -0.1 +0.2 +0.4
remove
IAI47_07825
plot		 remove
IAI47_07830
plot		 remove
IAI47_07835		 remove
IAI47_07840
plot		 remove
IAI47_07845
plot