Fitness for 5 genes in Pantoea sp. MT58

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500 ntIAI47_07805 and IAI47_07810 are separated by 95 nucleotidesIAI47_07810 and IAI47_07815 overlap by 4 nucleotidesIAI47_07815 and IAI47_07820 overlap by 47 nucleotidesIAI47_07820 and IAI47_07825 are separated by 147 nucleotides IAI47_07805: IAI47_07805 - phosphonate ABC transporter substrate-binding protein, at 1,651,693 to 1,652,619 _07805 IAI47_07810: IAI47_07810 - phosphonate ABC transporter, permease protein PhnE, at 1,652,715 to 1,653,575 _07810 IAI47_07815: IAI47_07815 - phosphonate ABC transporter, permease protein PhnE, at 1,653,572 to 1,654,456 _07815 IAI47_07820: IAI47_07820 - response regulator, at 1,654,410 to 1,657,028 _07820 IAI47_07825: IAI47_07825 - sugar ABC transporter ATP-binding protein, at 1,657,176 to 1,658,690 _07825
Group Condition IAI47_07805 IAI47_07810 IAI47_07815 IAI47_07820 IAI47_07825
nitrogen source Ammonium chloride (N) -0.1 +0.1 -0.3 -0.7 -0.3
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.2 -0.7 -0.3 +0.1 -0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=48hrs; Outgrowth=LBkan50 -0.2 -0.6 -0.2 +0.1 +0.1
survival Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 -0.5 -0.1 -0.2 +0.1
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.1 +0.1 -0.8 +0.0 +0.2
carbon source Ying_sugar7 rep C; time point 2 -0.2 +0.5 +0.1 -0.5 -0.1
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.1 -0.6 +0.1 +0.4 +0.1
stress copper (II) chloride 2 uM, anaerobic +0.4 +0.5 -0.3 -0.3 -0.2
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 +0.3 +0.1 +0.3 -0.1
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 +0.2 +0.5 -0.3 +0.1
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 -0.3 +0.3 -0.3 +0.2
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 +0.5 -0.1 +0.3 -0.3
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.5 +0.2 +0.5 +0.2 +0.0
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 +0.9 -0.3 +0.1 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.4 -0.3 +0.2 +0.2
survival Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.3 +0.4 +0.1 -0.6 +0.3
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.4 +0.5 +0.3 +0.2 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.7 +1.3 +0.0 +0.2 -0.1
survival Survival; Treatment=FW109 (pH 4.4); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.0 +1.0 -0.1 -0.2 +0.1
survival Survival; Treatment=FW106 (pH3.9); TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.4 +0.3 +0.5 +0.2 -0.6
survival Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.2 +0.3 +0.2 -0.3 +0.3
survival Survival; Treatment=FW300 (pH7.4) with 0.2 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.4 +0.9 +0.0 +0.1 +0.2
survival Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.3 +0.6 +0.3 +0.2 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose with 10 mg/L CCCP; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 +0.6 +0.6 +0.1 -0.2 -0.1
survival Survival; Treatment=UGA synthetic gw pH5.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 +0.7 +0.3 +0.1 +0.1
survival Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50 -0.2 +0.6 -0.0 +0.2 +0.4
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 -0.2 +0.7 +0.5 +0.1 +0.2
survival Survival; Treatment=UGA synthetic gw pH4.4; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 +0.4 +0.5 -0.0 -0.1
survival Survival; Treatment=FW106 (pH3.9) with 1 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.1 +0.6 -0.2 +0.7 +0.0
survival Survival; Treatment=UGA synthetic gw pH5.0; TreatmentDuration=24hrs; Outgrowth=LBkan50 +0.4 +0.4 +0.4 -0.1 +0.2
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IAI47_07805
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IAI47_07810
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IAI47_07820
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IAI47_07825
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